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This repository has been archived by the owner on Mar 19, 2024. It is now read-only.

include final decision into holistic.csv #292

include final decision into holistic.csv

include final decision into holistic.csv #292

Workflow file for this run

name: Local test
on:
push:
branches: [ "master", "my", "devel" ]
pull_request:
branches: [ "master", "my", "devel" ]
jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Install dependencies
run: sudo apt-get update && sudo apt-get install -y python3 python3-pip mafft ncbi-blast+ && pip3 install pytest pytest-cov
- name: Run build
run: pip3 install .
- name: Run tests and collect coverage
run: pytest -v -m "not overnight" --cov=./bin --cov=./intact --cov=./util
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v3
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}