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| [["index.html", "[Name of Workshop][Year] Welcome", " [Name of Workshop][Year] Instructors: [list instructor names here] [Insert dates of the workshop] Welcome Welcome to CBW’s [workshop name, year] Workshop! Put some introductory content here. (ex. links to bioinformatics.ca, general info) "],["course-schedule.html", "Course Schedule Pre-workshop Materials Computing Setup & Downloads Meet Your Faculty Class Photo TEMPLATE-REFERENCES", " Course Schedule Copy paste a table into https://www.tablesgenerator.com/markdown_tables (select convert to markdown) to create a table in markdown. Pre-workshop Materials Click here for your prework! Computing Setup & Downloads Insert downloads (ex. datasets) or other tech instructions here (ex. AWS Instructions) Meet Your Faculty Here’s your team! Instructor, TA, … Job Title Company/University/… Location — contact information [insert description of the person] Michelle Brazas, PhD Scientific Director Canadian Bioinformatics Workshops (CBW) Toronto, ON, CA — [email protected] Dr. Michelle Brazas is the Associate Director for Adaptive Oncology at the Ontario Institute for Cancer Research (OICR), and acting Scientific Director at Bioinformatics.ca. Previously, Dr. Brazas was the Program Manager for Bioinformatics.ca and a faculty member in Biotechnology at BCIT. Michelle co-founded and runs the Toronto Bioinformatics User Group (TorBUG) now in its 11th season, and plays an active role in the International Society of Computational Biology where she sits on the Board of Directors and Executive Board. Nia Hughes (she/her) Program Manager, Bioinformatics.ca Ontario Institute for Cancer Research Toronto, ON, Canada — [email protected] Nia is the Program Manager for Bioinformatics.ca, where she coordinates the Canadian Bioinformatics Workshop Series. Prior to starting at OICR, she completed her M.Sc. in Bioinformatics from the University of Guelph in 2020 before working there as a bioinformatician studying epigenetic and transcriptomic patterns across maize varieties. Class Photo <- Replace the file address to your actual class photo file location TEMPLATE-REFERENCES Everything below will hopefully help you create a workshop website and understand how to work with this template. Comments Notes: is the notation for making a comment in a .R/md file. The comment begins after symbols. Some explanations for this template will be in these comments. You can instantly make a comment by clicking on the line with the text you want to comment and using the keyboard command: cmd/ctrl + shift + c. Content in Square Brackets Content that you should replace is written in square brackets [insert here]. Quick Formatting Copy and paste the below formatting into your files! Create a callout > Callout > > callout "],["module-1.html", "Module 1 Lecture Lab", " Module 1 Welcome to module 1! Lecture Here is an example of a pdf embedded: Here is an example of a YouTube video embedded: ^ HEIGHT HAS A BUG Downloads [insert your downloads for this module here (ex. datasets)] Lab [Your lab here] # Your R code here # For example: x <- 42 x ## [1] 42 # Your python code here # For example: print("hello world") ## hello world # Your bash code here # For example: pwd ## /Users/jqiu/Documents/CBWgithub/cbw-dev-templates-docs/bookdown-template Try running these code “chunks” by pressing the green (left-pointing) triangle next to your code chunks. You will see the code run in the console and the output provided below the code chunk. The output of the code will also be produced under the code chunk on your website page. "],["module-2.html", "Module 2 Lecture Lab", " Module 2 Lecture Lab put some example of producing images, show chunk options include formatting options "],["404.html", "Error 404: This page does not exist.", " Error 404: This page does not exist. This page does not exist anymore! Try going back to the workshop homepage or the bioinformatics.ca homepage. You must update these pages for new workshops. "]] | ||
| [["index.html", "[Name of Workshop][Year] Welcome", " [Name of Workshop][Year] Instructors: [list instructor names here] [Insert dates of the workshop] Welcome Welcome to CBW’s [workshop name, year] Workshop! Put some introductory content here. (ex. links to bioinformatics.ca, general info) "],["course-schedule.html", "Course Schedule Pre-workshop Materials Computing Setup & Downloads Meet Your Faculty Class Photo", " Course Schedule Copy paste a table into https://www.tablesgenerator.com/markdown_tables (select convert to markdown) to create a table in markdown. Pre-workshop Materials Click here for your prework! Computing Setup & Downloads Insert downloads (ex. datasets) or other tech instructions here (ex. AWS Instructions) Meet Your Faculty Here’s your team! Instructor, TA, … Job Title Company/University/… Location — contact information [insert description of the person] Michelle Brazas, PhD Scientific Director Canadian Bioinformatics Workshops (CBW) Toronto, ON, CA — [email protected] Dr. Michelle Brazas is the Associate Director for Adaptive Oncology at the Ontario Institute for Cancer Research (OICR), and acting Scientific Director at Bioinformatics.ca. Previously, Dr. Brazas was the Program Manager for Bioinformatics.ca and a faculty member in Biotechnology at BCIT. Michelle co-founded and runs the Toronto Bioinformatics User Group (TorBUG) now in its 11th season, and plays an active role in the International Society of Computational Biology where she sits on the Board of Directors and Executive Board. Nia Hughes (she/her) Program Manager, Bioinformatics.ca Ontario Institute for Cancer Research Toronto, ON, Canada — [email protected] Nia is the Program Manager for Bioinformatics.ca, where she coordinates the Canadian Bioinformatics Workshop Series. Prior to starting at OICR, she completed her M.Sc. in Bioinformatics from the University of Guelph in 2020 before working there as a bioinformatician studying epigenetic and transcriptomic patterns across maize varieties. Class Photo <- Replace the file address to your actual class photo file location "],["module-1.html", "Module 1 Lecture Lab", " Module 1 Welcome to module 1! Lecture Here is an example of a pdf embedded: Here is an example of a YouTube video embedded: ^ HEIGHT HAS A BUG Downloads [insert your downloads for this module here (ex. datasets)] Lab [Your lab here] # Your R code here # For example: x <- 42 x ## [1] 42 # Your python code here # For example: print("hello world") ## hello world # Your bash code here # For example: pwd ## /Users/jqiu/Documents/CBWgithub/cbw-dev-templates-docs/bookdown-template Try running these code “chunks” by pressing the green (left-pointing) triangle next to your code chunks. You will see the code run in the console and the output provided below the code chunk. The output of the code will also be produced under the code chunk on your website page. "],["module-2.html", "Module 2 Lecture Lab", " Module 2 Lecture Lab put some example of producing images, show chunk options include formatting options "],["404.html", "Error 404: This page does not exist.", " Error 404: This page does not exist. This page does not exist anymore! Try going back to the workshop homepage or the bioinformatics.ca homepage. You must update these pages for new workshops. "]] |
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