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End time set by window creation always set to be smaller than maximum value in original data #15
More intuitive names for pergola scripts options. Old ones are conserved to maintain backwards compatibility with older versions, #19
Output file name can be set using -o, --output_file_name flag. When multiple input files are found, output files are named with an ordinal at the beginning, #20
Version is set in pergola/_version.py and retrieve from there elsewhere, including the scripts (pergola_rules, jaaba_to_pergola and pergola_isatab). In this latter case using -v flag.
Time shift and first phase can be set from pergola script. Implemented as --starting_phase and --shift options. Closes #22