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Bachmann_Model_Quelle

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Abel Hodelin Hernandez edited this page Jun 23, 2021 · 12 revisions

Which sources for the Bachmann model already exist?

A search to check for available Bachmann model was performed (see below).

Results

In our search were found four SBML-Bachmann models in two different repositories, JWS Online and BioModels

  1. Model contained in supplement of original paper published in Molecular Systems Biology 7:516 ('original' 🎉 SBML-Model)
  2. The BioModels database, which is a repository of mathematical models of biological and biomedical systems hosts a vast selection of existing mechanistic models in standard formats. The search term 'bachmann' revealed 10-SBML-results, two of which contained the model for the Bachmann model could be identified:

A list of the additionally provided files can be found withon the pages of group 1.

  1. The JWS online database, which is giving access to curated models of biological systems, allowing the users to run these models in a web browser and providing assistance to manuscript reviewers by storing and curating kinetic models awaiting publication contained two sources for the Bachmann model
  1. Search engine quest (google)

So additional SMBL-sources could be identified via search engine quest.

Check out how we compared the SMBL-files in the following article

Bioinformatics & Systems biology SS 2021

Introduction

Administrative-Overview

Executive-Summary

Group 1

Group 2

Group 3

Group 4

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