v1.4.2

• gzip input support
• ab1 input support

See Changelog for all changes

v1.4.1

IGV included and samtools version change

See Changelog

v1.4.0

• New faster/easier installation method
• primer file support for trimming primers
• Various bug fixes

See Changelog for all changes

v1.3.0 - Filter Reads

Introduces new stage where you can filter reads out based on some criteria
First release that should be on Zenodo

See Changelog for all changes

v1.2.5 - Public Release

This is the first public release of ngs_mapper.

v1.2.4 -- Quick fix for documentation

Just fixes documentation for issue #6 as it was missed during v1.2.3

v1.2.3 - Output directory/TMPDIR

See Changelog for full details of changes

v1.2.2 - Python 2.6 Support

See Changelog for details of changes

v1.2 Beta

Version 1.2 beta release for internal testing at WRAIR

See changelog for changes in this version

Version 1.1.0

• Various bug fixes
• Threaded base_caller.py
• ion_sync
• Platforms now identified by read identifiers instead of filenames
• Documentation now installs with project
• Offline installation instructions
• bwa now runs in a temporary directory inside of the project temporary directory so all project data is located in one place
• new key in config.yaml called ion_sync

See all related issues for this version
Milestone v1.1.0