As part of our epic Findability Crusade, here you can find our analysis code, links to publications and preprints, and links to public data. We strive to provide triangulation among code, data, and publications so that no matter which information is discovered first, the other two are readily findable from each entry point.
While all public data are listed in the Readme file of each project, below is a list of our public data depsited on NCBI
| Accession | Title | Links |
|---|---|---|
| PRJNA559185 | Microbiome Resilience in Soil Mesocosms Exposed to Heat Stress | BioSample: 123, SRA: 984 |
| PRJNA635871 | Abiotic Treatment to Common Bean Plants Results in an Altered Endophytic Seed Microbiome | BioSample: 3, SRA: 46 |
| PRJNA714251 | Endophytic microbiome of single common bean seeds | BioSample: 3, SRA: 92 |
| PRJNA841769 | Mock community standard for multi-step assessment of microbiome protocols | BioSample: 4, SRA: 4 |
| PRJNA526826 | Ecological selection for small microbial genomes along a temperate-to-thermal soil gradient | BioSample: 104 |
| PRJNA844896 | Phyllosphere exudates select for distinct microbiome members in sorghum epicuticular wax and aerial root mucilage | BioSample: 239, SRA: 414 |
| PRJNA812898 | A coevolution experiment between Flavobacterium johnsoniae and Burkholderia thailandensis reveals parallel mutations that reduce antibiotic susceptibility | BioSample: 23, SRA: 23 |
| PRJNA862978 | Impact of drought severity on assembly of rhizosphere microbial communities in two plant species | BioSample: 306, SRA: 306 |
| PRJNA932434 | Dormancy resuscitation dynamics of rhizosphere soil in response to phytohormones | BioSample: 384, SRA: 384 |
| PRJNA451377 | Mimulus guttatus rhizosphere microbiome amplicon sequencing | BioSample: 40, SRA: 40 |
| PRJNA755191 | Microbial diversity associated with soil aggregates | BioSample: 44, SRA: 44 |
| PRJNA756187 | Functionality of the common bean microbiome through plant development | BioSample: 27, SRA: 27 |
| PRJNA754506 | Resistome and virulome in aquatic environments from Brazil | BioSample: 16, SRA: 16 |
| PRJNA755265 | Ammonia-oxidizing bacterial diversity associated with soil aggregates | BioSample: 42, SRA: 42 |
| PRJNA755273 | Ammonia-oxidizing archaeal diversity associated with soil aggregates | BioSample: 42, SRA: 42 |
| PRJNA606063 | Common bean rhizosphere microbiome through plant development | BioSample: 265, SRA: 265 |
| PRJNA526056 | Bulk soil microbiome (part of Mimulus guttatus reciprocal transplant) | BioSample: 10, SRA: 10 |
| PRJNA524532 | Phaseolus vulgaris rhizosphere samples 16S rRNA and ITS | BioSample: 72, SRA: 72 |
| PRJNA492298 | Surface soil microbial communities from active vent of coal mine fire in Centralia Pennsylvania | BioSample: 4, SRA: 2 |
| PRJNA507629 | 16S rRNA and ITS gene sequence of apple replant rhizosphere in Michigan | BioSample: 90, SRA: 90 |
| PRJNA490178 | 16S sequencing reads from agricultural (corn) soil exposed to drying, wetting, and phytohormones | BioSample: 80, SRA: 80 |
| PRJNA454289 | The effect of drought/nutrients on bean rhizosphere Metagenome | BioSample: 48, SRA: 48 |
| PRJNA339832 | 16S rRNA gene amplicon sequencing data from Centralia (PA, USA) coal mine surface soil | BioSample: 54, SRA: 54 |