Adding code for installing miniConda.

OHDSI · Mar 28, 2024 · 895f0ea · 895f0ea
1 parent d8ede45
commit 895f0ea
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Showing 3 changed files with 6 additions and 1 deletion.
diff --git a/extras/Releasing/Dependencies.rds b/extras/Releasing/Dependencies.rds
diff --git a/extras/Releasing/RunCheckOnAllHadesPackages.R b/extras/Releasing/RunCheckOnAllHadesPackages.R
@@ -9,7 +9,7 @@ saveRDS(prepareForPackageCheck(), "Dependencies.rds")
 dependencies <- readRDS("Dependencies.rds")
 # Skipping Hydra, as renv seems to clash with skeleton renv environments:
 dependencies <- dependencies[dependencies$name != "Hydra", ]
-for (i in 4:nrow(dependencies)) {
+for (i in 1:nrow(dependencies)) {
   if (dependencies$name[i] == "PatientLevelPrediction") {
     # Temp workaround for https://github.com/OHDSI/PatientLevelPrediction/issues/435
     additionalCheckArgs <- c("--no-build-vignettes", "--ignore-vignettes")

diff --git a/extras/Releasing/SetupPython.R b/extras/Releasing/SetupPython.R
@@ -12,3 +12,8 @@ reticulate::py_install("torch")
 # Error in py_module_import(module, convert = convert) : 
 #   TypeError: the first argument must be callable
 
+# PatientLevelPrediction requires Anaconda to be installed ---------------------
+reticulate::install_miniconda()
+# Test:
+reticulate::conda_binary()
+