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edit GHA to enable macOS tests by installing curl from source; simila…
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…r to visiumStitched
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lcolladotor committed Dec 13, 2024
1 parent 0474fc7 commit d000478
Showing 1 changed file with 12 additions and 1 deletion.
13 changes: 12 additions & 1 deletion .github/workflows/check-bioc.yml
Original file line number Diff line number Diff line change
Expand Up @@ -53,7 +53,7 @@ jobs:
matrix:
config:
- { os: ubuntu-latest, r: '4.4', bioc: '3.20', cont: "bioconductor/bioconductor_docker:RELEASE_3_20", rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest" }
# - { os: macOS-latest, r: '4.4', bioc: '3.20'}
- { os: macOS-latest, r: '4.4', bioc: '3.20'}
- { os: windows-latest, r: '4.4', bioc: '3.20'}
## Check https://github.com/r-lib/actions/tree/master/examples
## for examples using the http-user-agent
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## Required for tcltk
brew install xquartz --cask
## Latest curl
brew install curl pkg-config
- name: Install macOS curl from source
if: matrix.config.os == 'macOS-latest'
run: |
message(paste('****', Sys.time(), 'installing curl from source ****'))
Sys.setenv(PKG_CONFIG_PATH="/opt/homebrew/opt/curl/lib/pkgconfig:/usr/local/opt/curl/lib/pkgconfig")
install.packages("curl", type = "source")
shell: Rscript {0}

- name: Install Windows system dependencies
if: runner.os == 'Windows'
run: |
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