Deploying to gh-pages from @ deae1fe 🚀

LieberInstitute · Oct 17, 2023 · 8b17e67 · 8b17e67
1 parent c9ddb7c
commit 8b17e67
Show file tree

Hide file tree

Showing 6 changed files with 57 additions and 21 deletions.
diff --git a/articles/slurmjobs.html b/articles/slurmjobs.html
diff --git a/pkgdown.yml b/pkgdown.yml
@@ -3,5 +3,5 @@ pkgdown: 2.0.7
 pkgdown_sha: ~
 articles:
   slurmjobs: slurmjobs.html
-last_built: 2023-10-16T17:58Z
+last_built: 2023-10-17T19:01Z
 
diff --git a/reference/array_submit.html b/reference/array_submit.html
diff --git a/reference/array_submit_example_2023-10-17.sh b/reference/array_submit_example_2023-10-17.sh
@@ -0,0 +1,36 @@
+#!/bin/bash
+#SBATCH -p shared
+#SBATCH --mem-per-cpu=10G
+#SBATCH --job-name=array_submit_example_2023-10-17
+#SBATCH -c 1
+#SBATCH -o logs/array_submit_example_2023-10-17.%a.txt
+#SBATCH -e logs/array_submit_example_2023-10-17.%a.txt
+#SBATCH --mail-type=ALL
+#SBATCH --array=1-100%20
+
+set -e
+
+echo "**** Job starts ****"
+date
+
+echo "**** JHPCE info ****"
+echo "User: ${USER}"
+echo "Job id: ${SLURM_JOB_ID}"
+echo "Job name: ${SLURM_JOB_NAME}"
+echo "Node name: ${SLURMD_NODENAME}"
+echo "Task id: ${SLURM_ARRAY_TASK_ID}"
+
+## Load the R module
+module load conda_R/4.3
+
+## List current modules for reproducibility
+module list
+
+## Edit with your job command
+Rscript -e "options(width = 120); sessioninfo::session_info()"
+
+echo "**** Job ends ****"
+date
+
+## This script was made using slurmjobs version 0.99.0
+## available from http://research.libd.org/slurmjobs/
diff --git a/reference/job_loop.html b/reference/job_loop.html
diff --git a/reference/job_single.html b/reference/job_single.html