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Nick-Eagles committed Feb 13, 2024
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2 changes: 1 addition & 1 deletion 404.html

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2 changes: 1 addition & 1 deletion CODE_OF_CONDUCT.html

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2 changes: 1 addition & 1 deletion CONTRIBUTING.html

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2 changes: 1 addition & 1 deletion SUPPORT.html

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2 changes: 1 addition & 1 deletion articles/index.html

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85 changes: 44 additions & 41 deletions articles/slurmjobs.html

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14 changes: 7 additions & 7 deletions authors.html

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14 changes: 7 additions & 7 deletions index.html

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7 changes: 6 additions & 1 deletion news/index.html

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2 changes: 1 addition & 1 deletion pkgdown.yml
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Expand Up @@ -3,5 +3,5 @@ pkgdown: 2.0.7
pkgdown_sha: ~
articles:
slurmjobs: slurmjobs.html
last_built: 2023-11-29T17:34Z
last_built: 2024-02-13T19:32Z

8 changes: 4 additions & 4 deletions reference/array_submit.html

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37 changes: 37 additions & 0 deletions reference/array_submit_example_2024-02-13.sh
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#!/bin/bash
#SBATCH -p shared
#SBATCH --mem=10G
#SBATCH --job-name=array_submit_example_2024-02-13
#SBATCH -c 1
#SBATCH -t 1-00:00:00
#SBATCH -o logs/array_submit_example_2024-02-13.%a.txt
#SBATCH -e logs/array_submit_example_2024-02-13.%a.txt
#SBATCH --mail-type=ALL
#SBATCH --array=1-100%20

set -e

echo "**** Job starts ****"
date

echo "**** JHPCE info ****"
echo "User: ${USER}"
echo "Job id: ${SLURM_JOB_ID}"
echo "Job name: ${SLURM_JOB_NAME}"
echo "Node name: ${SLURMD_NODENAME}"
echo "Task id: ${SLURM_ARRAY_TASK_ID}"

## Load the R module
module load conda_R/4.3

## List current modules for reproducibility
module list

## Edit with your job command
Rscript -e "options(width = 120); sessioninfo::session_info()"

echo "**** Job ends ****"
date

## This script was made using slurmjobs version 1.2.0
## available from http://research.libd.org/slurmjobs/
2 changes: 1 addition & 1 deletion reference/get_list_indexing.html

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2 changes: 1 addition & 1 deletion reference/get_short_flags.html

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2 changes: 1 addition & 1 deletion reference/index.html

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2 changes: 1 addition & 1 deletion reference/job_info.html

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2 changes: 1 addition & 1 deletion reference/job_info_df.html

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2 changes: 1 addition & 1 deletion reference/job_loop.html

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2 changes: 1 addition & 1 deletion reference/job_report.html

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