Skip to content

Commit

Permalink
Renamed downloaded files + added checksums + added local_ to local vars
Browse files Browse the repository at this point in the history
  • Loading branch information
Orient committed Nov 1, 2023
1 parent 2a73fc0 commit 39a5ec1
Showing 1 changed file with 10 additions and 7 deletions.
17 changes: 10 additions & 7 deletions easybuild/easyconfigs/o/Oases/Oases-20180312-GCC-12.3.0.eb
Original file line number Diff line number Diff line change
Expand Up @@ -11,20 +11,23 @@ description = """Oases is a de novo transcriptome assembler designed to produce
toolchain = {'name': 'GCC', 'version': '12.3.0'}

# This is taken from the Oases repo to avoid setting git_config in sources
velvet_commit = '9adf09f7ded7fedaf6b0e5e4edf9f46602e263d3'

sources = [
'%s.tar.gz' % local_commit,
'%s.tar.gz' % velvet_commit,
]
local_velvet_commit = '9adf09f7ded7fedaf6b0e5e4edf9f46602e263d3'

source_urls = [
'https://github.com/dzerbino/%(namelower)s/archive/',
'https://github.com/dzerbino/velvet/archive/',
]
sources = [
{'download_filename': '%s.tar.gz' % local_commit, 'filename': '%(namelower)s-%(version)s.tar.gz'},
{'download_filename': '%s.tar.gz' % local_velvet_commit, 'filename': 'velvet-20140815.tar.gz'}
]
checksums = [
{'oases-20180312.tar.gz': 'f526b84e9fa3e5f89b728f4a71b8bd23b336b8a6cd83a2d88414710592ec5e4e'},
{'velvet-20140815.tar.gz': '8e952e3a4bf2ffae586a64e5e97029c9fdd53b5e1991106ef832d73e499b163b'},
]

# listed make targets exclude 'doc' on purpose
buildopts = ['VELVET_DIR=../velvet-%s cleanobj velvet oases' % velvet_commit]
buildopts = ['VELVET_DIR=../velvet-%s cleanobj velvet oases' % local_velvet_commit]
parallel = 1

files_to_copy = [(["oases"], 'bin'), "data", "scripts", "src", "doc", "LICENSE.txt", "README.md"]
Expand Down

0 comments on commit 39a5ec1

Please sign in to comment.