fix #12, major changes. introduced classes

Gregor-Mendel-Institute · Aug 14, 2018 · 96b4c5d · 96b4c5d
1 parent 425eaaf
commit 96b4c5d
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Showing 4 changed files with 495 additions and 444 deletions.
diff --git a/snpmatch/__init__.py b/snpmatch/__init__.py
@@ -128,7 +128,7 @@ def snpmatch_parser(args):
     if os.path.isfile(args['inFile'] + ".snpmatch.npz"):
       os.remove(args['inFile'] + ".snpmatch.npz")
   from snpmatch.core import parsers
-  parsers.parseInput(inFile = args['inFile'], logDebug =  args['logDebug'], outFile = args['outFile'])
+  parsers.potatoParser(inFile = args['inFile'], logDebug =  args['logDebug'], outFile = args['outFile'])
 
 def genotype_cross(args):
   #checkARGs(args)