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@Gregor-Mendel-Institute

GMI: Gregor Mendel Institute of Molecular Plant Biology GmbH

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  1. SNPmatch SNPmatch Public

    A simple python library to identify the most likely strain from the population

    Python 9 5

Repositories

Showing 10 of 66 repositories
  • TRG-ImageProcessing Public

    Swarts Lab CNN stuff

    Gregor-Mendel-Institute/TRG-ImageProcessing’s past year of commit activity
    Python 12 MIT 5 2 1 Updated Dec 17, 2024
  • bookend Public

    End-guided RNA assembler

    Gregor-Mendel-Institute/bookend’s past year of commit activity
    Python 15 MIT 1 2 0 Updated Nov 5, 2024
  • PROalign Public

    Modified from https://github.com/JAJ256/PROseq_alignment.sh

    Gregor-Mendel-Institute/PROalign’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated May 21, 2024
  • nf-haplocaller Public Forked from rbpisupati/nf-haplocaller

    Nextflow pipeline for GATK best practices (HaplotypeCaller)

    Gregor-Mendel-Institute/nf-haplocaller’s past year of commit activity
    Nextflow 0 MIT 2 1 0 Updated Mar 8, 2024
  • GWA-Portal Public

    Web-app to store an display GWAS studies

    Gregor-Mendel-Institute/GWA-Portal’s past year of commit activity
    Java 5 5 61 7 Updated Feb 29, 2024
  • nanoPARE Public

    RNA 5' analysis tools for use with the nanoPARE protocol

    Gregor-Mendel-Institute/nanoPARE’s past year of commit activity
    Python 1 GPL-3.0 2 4 0 Updated Feb 8, 2024
  • SNPmatch Public

    A simple python library to identify the most likely strain from the population

    Gregor-Mendel-Institute/SNPmatch’s past year of commit activity
    Python 9 MIT 5 2 0 Updated Jan 11, 2024
  • gwas_workshop Public Forked from picla/GWAS_workshop_CK

    basic GWAS workshop in jupyter notebook form

    Gregor-Mendel-Institute/gwas_workshop’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 3 0 0 Updated Oct 2, 2023
  • jamge_states_2023 Public

    Code and data for figures in elife paper

    Gregor-Mendel-Institute/jamge_states_2023’s past year of commit activity
    R 0 0 0 0 Updated May 9, 2023
  • gwaR Public

    A collection of R functions to conduct downstream GWAS analysis for arabidopsis thaliana.

    Gregor-Mendel-Institute/gwaR’s past year of commit activity
    R 5 MIT 1 0 0 Updated Jan 30, 2023
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