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fix test path

fix test path #5

name: '[Test] Test siibra-tutorials'
on:
push:
branches: ["**"]
workflow_dispatch:
inputs:
siibra_python_branch:
description: 'siibra-python branch to use'
required: false
default: 'main'
type: string
jobs:
test_tutorials:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install -r requirements.txt
pip install siibra_jugex
pip install matplotlib
pip install pytest nbmake
- name: checkout siibra-python
uses: actions/checkout@v4
with:
repository: FZJ-INM1-BDA/siibra-python
path: siibra-python-${{ github.run_id }}-${{ github.run_number }}
fetch-depth: 1
clean: True
ref: ${{ inputs.siibra_python_branch }}
- name: move siibra-python one up from workspace
run: mv siibra-python-${{ github.run_id }}-${{ github.run_number }} ../siibra-python
- name: Install siibra-python testing requirements
run: |
pip install -r ../siibra-python/requirements-test.txt
pip install -r ../siibra-python/requirements.txt
- name: Test tutorial notebooks with nbmake
run: pytest --nbmake --nbmake-timeout=1200 ./