update nifti links of jba 2.9 maps with links from dataset version a8… #5
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: '[test] check region id uniqueness' | |
on: | |
push: | |
paths: | |
- 'parcellations/**.json' | |
jobs: | |
check_region_id_uniqueness: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python 3.10 | |
uses: actions/setup-python@v4 | |
with: | |
python-version: '3.10' | |
- name: checkout siibra-python | |
uses: actions/checkout@v4 | |
with: | |
repository: FZJ-INM1-BDA/siibra-python | |
path: siibra-python-${{ github.run_id }}-${{ github.run_number }} | |
fetch-depth: 1 | |
clean: True | |
ref: 'main' | |
- name: move siibra-python one up from workspace | |
run: mv siibra-python-${{ github.run_id }}-${{ github.run_number }} ../siibra-python | |
- name: Install siibra-python testing requirements | |
run: | | |
pip install -r ../siibra-python/requirements-test.txt | |
pip install -r ../siibra-python/requirements.txt | |
- name: region id uniqueness test | |
run: | | |
export SIIBRA_USE_CONFIGURATION='./' | |
pytest ../siibra-python/e2e/core/test_parcellation.py::test_parc_id_uniqueness | |
pytest ../siibra-python/e2e/core/test_parcellation.py::test_region_id_uniqueness |