Merge pull request #148 from FZJ-INM1-BDA/fix_regionalMapApi

fix: siibra version & fix regional map
FZJ-INM1-BDA · Jan 23, 2024 · 7560e56 · 7560e56
2 parents f9fcead + 9faedc1
commit 7560e56
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Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/api/common/data_handlers/compounds/download.py b/api/common/data_handlers/compounds/download.py
@@ -128,7 +128,7 @@ def write_desc(filename, obj, **kwargs):
                 space: _space.Space = siibra.spaces[space_id]
                 region = siibra.get_region(parcellation_id, region_id)
                 region_filename = f"{region.key}.nii.gz"
-                regional_map = region.fetch_regional_map(space, siibra.MapType.STATISTICAL)
+                regional_map = region.get_regional_map(space, siibra.MapType.STATISTICAL).fetch()
                 zipfile.writestr(region_filename, gzip.compress(regional_map.to_bytes()))
                 write_desc(f'{region_filename}.info.md', region)
             except Exception as e:

diff --git a/api/common/data_handlers/volumes/parcellationmap.py b/api/common/data_handlers/volumes/parcellationmap.py
@@ -147,7 +147,7 @@ def get_parcellation_labelled_map(parcellation_id: str, space_id: str, region_id
     volume_data = None
     if region_id is not None:
         region = siibra.get_region(parcellation_id, region_id)
-        volume_data = region.fetch_regional_map(space_id, siibra.MapType.LABELLED)
+        volume_data = region.get_regional_map(space_id, siibra.MapType.LABELLED).fetch()
     else:
         labelled_map = siibra.get_map(parcellation_id, space_id, siibra.MapType.LABELLED)
         assert labelled_map is not None, f"{error_text} returns None"

diff --git a/requirements/siibra.txt b/requirements/siibra.txt
@@ -1,3 +1,3 @@
 # siibra==1.0a4
-git+https://github.com/FZJ-INM1-BDA/siibra-python.git@5789433407a70f921b7e03055533f043750c08c9
+git+https://github.com/FZJ-INM1-BDA/siibra-python.git@d5fa00f
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