v0.3.19-rc5 #481

Workflow file for this run

.github/workflows/docker-img.yml at bf04358

	name: '[cd]docker images'

	on:
	release:
	types:
	- published

	env:
	OKD_PROJECT: siibra-api
	OKD_PROD_ENDPOINT: https://okd.hbp.eu:443
	OKD_DEV_ENDPOINT: https://okd-dev.hbp.eu:443
	OKD_PROD_SECRET: ${{ secrets.OKD_PROD_SECRET }}
	OKD_DEV_SECRET: ${{ secrets.OKD_DEV_SECRET }}
	DOCKER_REGISTRY: 'docker-registry.ebrains.eu/siibra/'
	DOCKER_IMG: 'siibra-api'

	jobs:
	build-docker-img:
	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	include:
	- flavor: 'all'
	dockerfile: 'Dockerfile'
	tag_suffix: ''
	- flavor: 'worker'
	dockerfile: 'worker.dockerfile'
	tag_suffix: '-worker'
	- flavor: 'server'
	dockerfile: 'server.dockerfile'
	tag_suffix: '-server'
	- flavor: 'worker'
	dockerfile: 'worker-v4.dockerfile'
	tag_suffix: '-worker-v4'

	steps:
	- name: "Sanity check github.ref"
	run: echo GITHUB_REF - $GITHUB_REF - github.ref - ${{ github.ref }}
	- uses: actions/checkout@v4
	- name: "Build docker image"
	run: \|
	GIT_HASH=$(git rev-parse --short HEAD)
	cached_image=${{ env.DOCKER_REGISTRY }}${{ env.DOCKER_IMG }}:latest${{ matrix.tag_suffix }}
	echo "Pulling $cached_image to populate cached layers."
	docker pull $cached_image \|\| true
	docker build --build-arg GIT_HASH=$GIT_HASH -t siibra-api-tmp-img -f ${{ matrix.dockerfile }} .

	- name: "Tag and Push (rc)"
	if: ${{ contains(github.ref, 'rc') }}
	run: \|
	TAG_BASE=rc

	NEW_TAG=${{ env.DOCKER_REGISTRY }}${{ env.DOCKER_IMG }}:${TAG_BASE}${{ matrix.tag_suffix }}
	docker tag siibra-api-tmp-img ${NEW_TAG}

	echo "Login to docker registry"
	docker login \
	-u '${{ secrets.EBRAINS_DOCKER_REG_USER }}' \
	-p '${{ secrets.EBRAINS_DOCKER_REG_TOKEN }}' \
	docker-registry.ebrains.eu

	docker push $NEW_TAG

	- name: "Tag and Push (release)"
	if : ${{ (github.event_name == 'release') && !contains(github.ref, 'rc') }}
	run: \|

	echo "Login to docker registry"
	docker login \
	-u '${{ secrets.EBRAINS_DOCKER_REG_USER }}' \
	-p '${{ secrets.EBRAINS_DOCKER_REG_TOKEN }}' \
	docker-registry.ebrains.eu

	VERSION=$(cat VERSION)
	while [[ "$VERSION" == "." ]]
	do
	if [[ "$BREAK" == "0" ]]
	then
	echo "Fuse broke!"
	exit 1
	fi
	VERSIONED_DOCKERTAG=${{ env.DOCKER_REGISTRY }}${{ env.DOCKER_IMG }}:${VERSION}${{ matrix.tag_suffix }}
	echo "tagging and pushing $VERSIONED_DOCKERTAG"
	docker tag siibra-api-tmp-img $VERSIONED_DOCKERTAG
	docker push $VERSIONED_DOCKERTAG

	echo "Push successful... Incrementing version & break"
	VERSION=$(echo $VERSION \| sed -e 's/\.\w*$//g')
	BREAK=$(( "$BREAK" - 1 ))
	done
	echo "Done"

	setup-envvar:
	runs-on: ubuntu-latest
	outputs:
	version: ${{ steps.set-env-var.outputs.version }}
	needs: build-docker-img
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: '3.10'
	- name: 'Setting env var'
	id: set-env-var
	run: \|
	version=$(cat VERSION)

	if [[ -z "$version" ]]
	then
	echo "Version population failed: $version"
	exit 1
	fi

	echo version=$version >> $GITHUB_OUTPUT

	deploy-rc-on-data-validation:
	needs:
	- build-docker-img
	if: ${{ github.event_name == 'push' }}
	runs-on: self-hosted
	steps:
	- run: \|
	/bin/bash -c "cd /softwares/software && ./restart.sh"

	# rc
	rm-cache-rc-at-helm:
	needs: setup-envvar
	if: ${{ github.event_name == 'release' && contains(github.ref, 'rc') }}
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	- uses: ./.github/workflows/composite-set-k8s-cred
	with:
	secrets: ${{ secrets.KUBECONFIG }}
	- run: \|
	prod_server_pod=$(kubectl get pod \| grep server \| grep prod \| awk '{print $1}')
	echo exec on $prod_server_pod
	kubectl exec $prod_server_pod -- rm -rf /siibra-api-volume/${{ needs.setup-envvar.outputs.version }}-rc/*

	REDIS_POD=$(kubectl get pod -l app=cache-redis \| grep Running \| awk '{print $1}')
	echo kubectl exec $REDIS_POD -- /bin/ash -c 'redis-cli --scan --pattern "\[${{ needs.setup-envvar.outputs.version }}\]" \| while IFS= read -r line; do redis-cli del "$line"; done'
	kubectl exec $REDIS_POD -- /bin/ash -c 'redis-cli --scan --pattern "\[${{ needs.setup-envvar.outputs.version }}\]" \| while IFS= read -r line; do redis-cli del "$line"; done'

	warmup-rc-at-helm:
	needs:
	- setup-envvar
	- rm-cache-rc-at-helm
	runs-on: ubuntu-latest
	strategy:
	fail-fast: true
	max-parallel: 1
	matrix:
	include:
	- yml-file: .helm/adhoc/warm-cache.yaml
	podname: warmup-pod
	- yml-file: .helm/adhoc/warm-cache-v4.yaml
	podname: warmup-pod-v4
	steps:
	- uses: actions/checkout@v4
	- uses: ./.github/workflows/composite-set-k8s-cred
	with:
	secrets: ${{ secrets.KUBECONFIG }}
	- timeout-minutes: 120 # should not take more than 2h to warmup cache
	run: \|
	# Delete pod at the beginning of the workflow
	# This is so that logs can be inspected
	kubectl delete pod/${{ matrix.podname }} \|\| echo "Pod pod/${{ matrix.podname }} not found."

	# TODO Flaky
	# see .helm/siibra-api/templates/_helpers.tpl how siibra-api.cache-dir is defined

	WARM_CACHE_YML=$(SIIBRA_CACHEDIR=/siibra-api-volume/${{ needs.setup-envvar.outputs.version }}-rc/ envsubst < ${{ matrix.yml-file }})
	echo -e "WARM_CACHE_YML: \n$WARM_CACHE_YML"

	echo "$WARM_CACHE_YML" \| kubectl apply -f -

	while true
	do
	sleep 10
	POD_PHASE=$(kubectl get pod ${{ matrix.podname }} -o json \| jq -r '.status.phase')

	echo Possible phases: Pending, Running, Succeeded, Failed, Unknown
	echo Found phase: $POD_PHASE

	if [[ "$POD_PHASE" == "Failed" ]] \|\| [[ "$POD_PHASE" == "Unknown" ]]
	then
	exit 1
	fi

	if [[ "$POD_PHASE" == "Succeeded" ]]
	then
	exit 0
	fi
	done

	deploy-rc-via-helm:
	needs: warmup-rc-at-helm
	if: ${{ github.event_name == 'release' && contains(github.ref, 'rc') }}
	uses: ./.github/workflows/deploy-helm.yml
	with:
	DEPLOYMENT_NAME: rc
	secrets:
	KUBECONFIG: ${{ secrets.KUBECONFIG }}

	# prod
	copy-by-helm:
	needs: setup-envvar
	if: ${{ github.event_name == 'release' && !contains(github.ref, 'rc') }}
	runs-on: ubuntu-latest
	timeout-minutes: 15 # should not take more than 15 minutes to copy cache
	steps:
	- uses: actions/checkout@v4
	- uses: ./.github/workflows/composite-set-k8s-cred
	with:
	secrets: ${{ secrets.KUBECONFIG }}
	- name: 'set FROM_DIR TO_DIR'
	run: \|
	VERSION=${{ needs.setup-envvar.outputs.version }}

	# TODO use label exclusively in the future
	POD=$(kubectl get pod -l role=server -l app-flavor=rc -o json \| jq -r '.items[0].metadata.name')
	echo POD: $POD

	cache_str=$(kubectl exec $POD -- env \| grep SIIBRA_CACHEDIR)
	FROM_DIR=${cache_str//SIIBRA_CACHEDIR=/}
	TO_DIR=${FROM_DIR//-rc/}
	POD_NAME=copy-cache

	echo FROM_DIR: $FROM_DIR, TO_DIR: $TO_DIR, POD_NAME: $POD_NAME

	echo "FROM_DIR=$FROM_DIR" >> $GITHUB_ENV
	echo "TO_DIR=$TO_DIR" >> $GITHUB_ENV
	echo "POD_NAME=$POD_NAME" >> $GITHUB_ENV

	- name: 'start container'
	run: \|
	# delete pod before workflow, so that logs can be inspected
	kubectl delete pod/$POD_NAME \|\| echo "Pod pod/$POD_NAME not found."
	FROM_DIR=$FROM_DIR TO_DIR=$TO_DIR envsubst < .helm/adhoc/copy-cache.yaml \| kubectl apply -f -
	- name: 'Ensure copy completes'
	run: \|
	while true
	do
	sleep 10
	POD_PHASE=$(kubectl get pod $POD_NAME -o json \| jq -r '.status.phase')

	echo Possible phases: Pending, Running, Succeeded, Failed, Unknown
	echo Found phase: $POD_PHASE

	if [[ "$POD_PHASE" == "Failed" ]] \|\| [[ "$POD_PHASE" == "Unknown" ]]
	then
	exit 1
	fi

	if [[ "$POD_PHASE" == "Succeeded" ]]
	then
	exit 0
	fi
	done

	deploy-prod-via-helm:
	needs: copy-by-helm
	if: ${{ github.event_name == 'release' && !contains(github.ref, 'rc') }}
	uses: ./.github/workflows/deploy-helm.yml
	with:
	DEPLOYMENT_NAME: prod
	secrets:
	KUBECONFIG: ${{ secrets.KUBECONFIG }}

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v0.3.19-rc5 #481

Workflow file

v0.3.19-rc5 #481

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Workflow file for this run