Skip to content

Issues: EI-CoreBioinformatics/mikado

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

22 Open 306 Closed
22 Open 306 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

documentation :: some comments
#461 opened Nov 21, 2024 by EricDeveaud
self_training.py :: missing scikit-learn
#460 opened Nov 21, 2024 by EricDeveaud
Transcript sources and isoforms
#459 opened Oct 31, 2024 by 14zac2
ValueError and Invalid Target End Point Errors during Mikado Serialization
#458 opened Jul 17, 2024 by joseph144155
serialise load BLAST data error (Cannot use a compiled regex as replacement pattern with regex=False)
#457 opened Jun 13, 2024 by jolbi
3
Mikado pick does't add the CDS
#455 opened May 24, 2024 by francicco
Assign transcripts to loci
#452 opened Apr 27, 2024 by francicco
Error in mikado conda
#451 opened Apr 18, 2024 by edugenetico
Error with mikado serialise: 'Engine' object has no attribute 'cursor'
#450 opened Feb 26, 2024 by bbista
4
Error in rule asm_gff_stats
#449 opened Jan 10, 2024 by jwli-code
can't install Mikado by different ways
#448 opened Dec 8, 2023 by mezoderma
1
Parameters to avoid overlap
#447 opened Sep 28, 2023 by xiekunwhy
Unable to install mikado with mamba via multiple strategies
#445 opened Sep 1, 2023 by isaacvock
4
scipy._build_utils is no longer available in scipy 1.10+
#444 opened Aug 17, 2023 by boegel
Error running serialise
#442 opened Jun 6, 2023 by johannesnicolaus
1
Track gene/transcript ids
#441 opened May 5, 2023 by francicco
bonus to the models, that are presented in several transcript assemblies
#440 opened Apr 19, 2023 by sashulkaSh
Comparing two annotations
#439 opened Mar 14, 2023 by AlexdeMendoza
1
configuration error with mikado 2.3.2
#437 opened Feb 16, 2023 by baozg
1
Designing specific scoring file
#436 opened Nov 3, 2022 by allind
1
Best practice to use Mikado to score assembled lncRNA
#435 opened Oct 13, 2022 by cc-prolix
3
Add command line switches for compact genomes enhancement
#336 opened Nov 10, 2020 by lucventurini
@swarbred @lucventurini
1
ProTip! Adding no:label will show everything without a label.