{2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370

t1mk1k · 2023-10-19T16:44:39Z

Part of this request: https://gitlab.com/eessi/support/-/issues/14#note_1610960931

eessi-bot · 2023-10-19T16:44:46Z

Instance eessi-bot-mc-aws is configured to build:

arch x86_64/generic for repo eessi-hpc.org-2023.06-compat
arch x86_64/generic for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-software
arch aarch64/generic for repo eessi-hpc.org-2023.06-compat
arch aarch64/generic for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-software

casparvl · 2023-10-20T14:20:40Z

bot: build repo:eessi-2023.06-software arch:x86_64/intel/haswell

eessi-bot · 2023-10-20T14:20:42Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi-2023.06-software arch:x86_64/intel/haswell from casparvl
- expanded format: build repository:eessi-2023.06-software architecture:x86_64/intel/haswell
handling command build repository:eessi-2023.06-software architecture:x86_64/intel/haswell resulted in:
- no jobs were submitted

casparvl · 2023-10-20T15:59:14Z

bot: show_config

eessi-bot · 2023-10-20T15:59:17Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command show_config from casparvl
- expanded format: show_config
handling command show_config resulted in:
- added comment {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment) to show configuration

eessi-bot · 2023-10-20T15:59:19Z

Instance eessi-bot-mc-aws is configured to build:

arch x86_64/generic for repo eessi-hpc.org-2023.06-compat
arch x86_64/generic for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-software
arch aarch64/generic for repo eessi-hpc.org-2023.06-compat
arch aarch64/generic for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-software

casparvl · 2023-10-20T16:00:36Z

bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/intel/haswell

eessi-bot · 2023-10-20T16:00:39Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/intel/haswell from casparvl
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/intel/haswell
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/intel/haswell resulted in:
- submitted job 325, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)

eessi-bot · 2023-10-20T16:00:43Z

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-haswell for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/325

date	job status	comment
Oct 20 16:00:42 UTC 2023	submitted	job id `325` awaits release by job manager
Oct 20 16:01:33 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 20 16:06:36 UTC 2023	running	job `325` is running
Oct 20 16:31:00 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-325.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-haswell-1697819394.tar.gz` size: 72 MiB (76260526 bytes) entries: 36992 modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` software under 2023.06/software/linux/x86_64/intel/haswell/software `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `libidn2/2.3.2-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` other under 2023.06/software/linux/x86_64/intel/haswell `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

casparvl · 2023-10-23T07:54:55Z

bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2

eessi-bot · 2023-10-23T07:54:58Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2 from casparvl
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2 resulted in:
- submitted job 329, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)

eessi-bot · 2023-10-23T07:55:03Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/329

date	job status	comment
Oct 23 07:55:02 UTC 2023	submitted	job id `329` awaits release by job manager
Oct 23 07:55:51 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 23 08:00:54 UTC 2023	running	job `329` is running
Oct 23 08:20:15 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-329.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1698049166.tar.gz` size: 72 MiB (76199858 bytes) entries: 36992 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `libidn2/2.3.2-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` other under 2023.06/software/linux/x86_64/amd/zen2 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

casparvl · 2023-10-23T09:04:43Z

Fails while installing wget:

checking for OPENSSL... no
configure: error: Package requirements (openssl) were not met:

No package 'openssl' found

Consider adjusting the PKG_CONFIG_PATH environment variable if you
installed software in a non-standard prefix.

Alternatively, you may set the environment variables OPENSSL_CFLAGS
and OPENSSL_LIBS to avoid the need to call pkg-config.
See the pkg-config man page for more details.
 (at easybuild/tools/run.py:681 in parse_cmd_output)

Shouldn't this get picked up from the compat layer...?

casparvl · 2023-10-23T11:56:05Z

Ah, I see

# make sure pkg-config picks up system packages (OpenSSL & co)
preconfigopts = "export PKG_CONFIG_PATH=/usr/lib64/pkgconfig:/usr/lib/pkgconfig:/usr/lib/x86_64-linux-gnu/pkgconfig && "
configopts = '--with-ssl=openssl '

in the wget EasyConfig. That is probably not compatible with using sysroot :D

I guess we can do two things:

Change this in a hook, specifically for EESSI
Create an EasyBlock for wget that sets preconfigopts, and that takes sysroot into account

Option 2 is clearly the more generic one. But, I'll start by modifying the EasyConfig itself, and seeing if it installs then, just to be sure that this is causing the issue.

casparvl · 2023-10-23T12:52:15Z

Adapting the EasyConfig to

# make sure pkg-config picks up system packages (OpenSSL & co)
preconfigopts = "export PKG_CONFIG_PATH=/cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/usr/lib64/pkgconfig && "

works, so this was indeed the problem, and both option 1 and 2 should provide working solutions.

boegel · 2023-10-27T07:58:42Z

The problem with wget is fixed in easybuilders/easybuild-easyconfigs#19080, but that requires a small enhancement in EasyBuild framework, see easybuilders/easybuild-framework#4359, which will be included in the upcoming EasyBuild v4.8.2 release which I hope to get out in the next couple of days.

Once EasyBuild v4.8.2 is out, we should:

i) install EasyBuild v4.8.2 in the EESSI 2023.06 pilot repo (similar to {2023.06} EasyBuild v4.8.1 + re-install Java/11 with it #333);
ii) create a new YAML file for 2022a easyconfigs installed with EasyBuild v4.8.2 for EESSI 2023.06 (eessi-2023.06-eb-4.8.1-2022a.yml);

Since the changes in easybuilders/easybuild-easyconfigs#19080 will also be included in EasyBuild v4.8.2, there's no need to use --from-pr for wget.

boegel · 2023-10-27T08:00:12Z

Since the easyconfigs contributed in will also be included in EasyBuild v4.8.2, the contents of eessi-2023.06-eb-4.8.1-2022a.yml can just be:

easyconfigs:
  - DP3-6.0-foss-2022a:
  - WSClean-3.4-foss-2022a:

t1mk1k · 2023-10-30T10:00:34Z

@boegel and @casparvl, I have added an EasyStack file for EasyBuild 4.8.2. I'm not sure if I did it correctly, as the code seems to have changed from the 4.8.1 + Java/11 PR.

eessi-bot · 2023-10-30T10:00:36Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

account t1mk1k has NO permission to send commands to the bot

casparvl · 2023-10-30T10:25:55Z

bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2

eessi-bot · 2023-10-30T10:25:57Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2 from casparvl
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2 resulted in:
- submitted job 375, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)

eessi-bot · 2023-10-30T10:26:01Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/375

date	job status	comment
Oct 30 10:26:00 UTC 2023	submitted	job id `375` awaits release by job manager
Oct 30 10:26:04 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 30 10:34:07 UTC 2023	running	job `375` is running
Oct 30 10:39:12 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-375.out` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1698662287.tar.gz` size: 19 MiB (19953957 bytes) entries: 31123 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `EasyBuild/4.8.2.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `EasyBuild/4.8.2` other under 2023.06/software/linux/x86_64/amd/zen2 no other files in tarball

casparvl · 2023-10-30T11:07:34Z

Hm....

== ... (took < 1 sec)
  >> running command:
        [started at: 2023-10-30 10:37:44]
        [working dir: /project/60006/SHARED/jobs/2023.10/pr_370/event_b5928530-770e-11ee-98dd-2642c8fc92f1/run_000/linux_x86_64_amd_zen2/eessi-hpc.org-2023.06-software]
        [output logged in /tmp/eb-l4nzqpvd/easybuild-run_cmd-bn5pjy5o.log]
        bzip2 /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/amd/zen2/software/EasyBuild/4.8.2/easybuild/easybuild-EasyBuild-4.8.2-20231030.103744.log
  >> command completed: exit 0, ran in 00h00m09s
== COMPLETED: Installation ended successfully (took 1 min 47 secs)
== Results of the build can be found in the log file(s) /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/amd/zen2/software/EasyBuild/4.8.2/easybuild/easybuild-EasyBuild-4.8.2
-20231030.103744.log.bz2
== Build succeeded for 1 out of 1
== Temporary log file(s) /tmp/eb-l4nzqpvd/easybuild-kzz3q8n3.log* have been removed.
== Temporary directory /tmp/eb-l4nzqpvd has been removed.
ESC[32mLatest EasyBuild release installed, let's go!ESC[0m
ESC[33m>> Still no module for EasyBuild v4.8.2, trying with easyconfig EasyBuild-4.8.2.eb...ESC[0m
ESC[31mERROR: No easyconfig found for EasyBuild v4.8.2ESC[0m
Leaving Gentoo Prefix with exit status 1

Having a new EasyBuild deployed and using it immediately seems to have worked in #333 , but here it seesm to not find the module it just installed. It fails to find it in this line

I guess it might be caching, we could alter that script and insert an

module avail 2>&1 | grep -i easybuild/${EB_VERSION} &> ${ml_av_easybuild_out}
if [[ $? -eq 0 ]]; then
    echo_green ">> Module for EasyBuild v${EB_VERSION} found!"
else
    module avail --ignore_cache 2>&1 | grep -i easybuild/${EB_VERSION} &> ${ml_av_easybuild_out}
    if [[ $? -eq 0 ]]; then
        echo_green ">> Module for EasyBuild v${EB_VERSION} found!"
    else
       <the original 'else' block here>
   fi
fi
...

That way, we first try the cached module avail (which is fastest, and should give the EB module unless the PR added an EB version). If that fails, we try uncached. If that feels, we try to install (i.e. the original 'else' block).

ocaisa · 2023-10-31T15:09:19Z

bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2

eessi-bot · 2023-10-31T15:09:22Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2 from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2 resulted in:
- submitted job 409, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)

eessi-bot · 2023-10-31T15:09:26Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/409

date	job status	comment
Oct 31 15:09:25 UTC 2023	submitted	job id `409` awaits release by job manager
Oct 31 15:09:41 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 15:14:44 UTC 2023	running	job `409` is running
Oct 31 15:35:16 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-409.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1698766440.tar.gz` size: 78 MiB (81996249 bytes) entries: 37600 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` other under 2023.06/software/linux/x86_64/amd/zen2 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

ocaisa · 2023-10-31T16:05:36Z

bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2

eessi-bot · 2023-10-31T16:05:39Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2 from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2 resulted in:
- submitted job 410, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)

eessi-bot · 2023-10-31T16:05:43Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/410

date	job status	comment
Oct 31 16:05:42 UTC 2023	submitted	job id `410` awaits release by job manager
Oct 31 16:06:22 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 16:07:24 UTC 2023	running	job `410` is running
Oct 31 16:49:28 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-410.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1698770921.tar.gz` size: 131 MiB (138366350 bytes) entries: 41919 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/x86_64/amd/zen2 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

ocaisa · 2023-10-31T18:53:03Z

bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/generic
bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/intel/haswell
bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/intel/skylake_avx512
bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2
bot: build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen3
bot: build repo:eessi-hpc.org-2023.06-software arch:aarch64/generic
bot: build repo:eessi-hpc.org-2023.06-software arch:aarch64/neoverse_n1
bot: build repo:eessi-hpc.org-2023.06-software arch:aarch64/neoverse_v1

eessi-bot · 2023-10-31T18:53:06Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/generic from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/generic
received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/intel/haswell from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/intel/haswell
received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/intel/skylake_avx512 from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/intel/skylake_avx512
received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen2 from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2
received bot command build repo:eessi-hpc.org-2023.06-software arch:x86_64/amd/zen3 from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen3
received bot command build repo:eessi-hpc.org-2023.06-software arch:aarch64/generic from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:aarch64/generic
received bot command build repo:eessi-hpc.org-2023.06-software arch:aarch64/neoverse_n1 from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:aarch64/neoverse_n1
received bot command build repo:eessi-hpc.org-2023.06-software arch:aarch64/neoverse_v1 from ocaisa
- expanded format: build repository:eessi-hpc.org-2023.06-software architecture:aarch64/neoverse_v1
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/generic resulted in:
- submitted job 411, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/intel/haswell resulted in:
- submitted job 412, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/intel/skylake_avx512 resulted in:
- submitted job 413, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen2 resulted in:
- submitted job 414, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)
handling command build repository:eessi-hpc.org-2023.06-software architecture:x86_64/amd/zen3 resulted in:
- submitted job 415, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)
handling command build repository:eessi-hpc.org-2023.06-software architecture:aarch64/generic resulted in:
- submitted job 416, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)
handling command build repository:eessi-hpc.org-2023.06-software architecture:aarch64/neoverse_n1 resulted in:
- submitted job 417, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)
handling command build repository:eessi-hpc.org-2023.06-software architecture:aarch64/neoverse_v1 resulted in:
- submitted job 418, for details & status see {2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370 (comment)

eessi-bot · 2023-10-31T18:53:09Z

New job on instance eessi-bot-mc-aws for architecture x86_64-generic for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/411

date	job status	comment
Oct 31 18:53:08 UTC 2023	submitted	job id `411` awaits release by job manager
Oct 31 18:53:54 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 19:01:30 UTC 2023	running	job `411` is running
Oct 31 19:50:55 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-411.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1698781795.tar.gz` size: 131 MiB (137488861 bytes) entries: 41919 modules under 2023.06/software/linux/x86_64/generic/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/x86_64/generic/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/x86_64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:42:54 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-generic-1698781795.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-10-31T18:53:13Z

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-haswell for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/412

date	job status	comment
Oct 31 18:53:12 UTC 2023	submitted	job id `412` awaits release by job manager
Oct 31 18:53:56 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 19:02:42 UTC 2023	running	job `412` is running
Oct 31 19:51:58 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-412.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-haswell-1698781860.tar.gz` size: 132 MiB (138464562 bytes) entries: 41919 modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/x86_64/intel/haswell/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/x86_64/intel/haswell `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:43:15 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-haswell-1698781860.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-10-31T18:53:16Z

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/413

date	job status	comment
Oct 31 18:53:15 UTC 2023	submitted	job id `413` awaits release by job manager
Oct 31 18:53:59 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 19:02:45 UTC 2023	running	job `413` is running
Oct 31 19:42:17 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-413.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1698781258.tar.gz` size: 131 MiB (138331778 bytes) entries: 41919 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:43:35 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1698781258.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-10-31T18:53:20Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/414

date	job status	comment
Oct 31 18:53:19 UTC 2023	submitted	job id `414` awaits release by job manager
Oct 31 18:53:48 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 19:00:16 UTC 2023	running	job `414` is running
Oct 31 19:43:23 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-414.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1698781312.tar.gz` size: 131 MiB (138311289 bytes) entries: 41919 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/x86_64/amd/zen2 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:42:34 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen2-1698781312.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-10-31T18:53:24Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen3 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/415

date	job status	comment
Oct 31 18:53:23 UTC 2023	submitted	job id `415` awaits release by job manager
Oct 31 18:53:51 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 19:00:19 UTC 2023	running	job `415` is running
Oct 31 19:36:37 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-415.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen3-1698780935.tar.gz` size: 131 MiB (138307550 bytes) entries: 41919 modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/x86_64/amd/zen3/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/x86_64/amd/zen3 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:43:56 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen3-1698780935.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-10-31T18:53:27Z

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/416

date	job status	comment
Oct 31 18:53:26 UTC 2023	submitted	job id `416` awaits release by job manager
Oct 31 18:53:40 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 18:59:02 UTC 2023	running	job `416` is running
Oct 31 19:57:08 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-416.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1698782127.tar.gz` size: 127 MiB (133996961 bytes) entries: 41919 modules under 2023.06/software/linux/aarch64/generic/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/aarch64/generic/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/aarch64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:44:17 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-generic-1698782127.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-10-31T18:53:31Z

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_n1 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/417

date	job status	comment
Oct 31 18:53:30 UTC 2023	submitted	job id `417` awaits release by job manager
Oct 31 18:53:43 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 18:59:05 UTC 2023	running	job `417` is running
Oct 31 19:37:46 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-417.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_n1-1698780985.tar.gz` size: 127 MiB (133987857 bytes) entries: 41919 modules under 2023.06/software/linux/aarch64/neoverse_n1/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/aarch64/neoverse_n1/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/aarch64/neoverse_n1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:44:38 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_n1-1698780985.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-10-31T18:53:34Z

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_v1 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_370/418

date	job status	comment
Oct 31 18:53:33 UTC 2023	submitted	job id `418` awaits release by job manager
Oct 31 18:53:46 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 18:59:08 UTC 2023	running	job `418` is running
Oct 31 19:30:41 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-418.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-1698780525.tar.gz` size: 127 MiB (134067624 bytes) entries: 41919 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all `AOFlagger/3.4.0-foss-2022a.lua` `Armadillo/11.4.3-foss-2022a.lua` `arpack-ng/3.8.0-foss-2022a.lua` `Boost/1.79.0-GCC-11.3.0.lua` `Boost.Python/1.79.0-GCC-11.3.0.lua` `casacore/3.5.0-foss-2022a.lua` `CFITSIO/4.2.0-GCCcore-11.3.0.lua` `CMake/3.24.3-GCCcore-11.3.0.lua` `DP3/6.0-foss-2022a.lua` `EveryBeam/0.5.2-foss-2022a.lua` `libidn2/2.3.2-GCCcore-11.3.0.lua` `Lua/5.4.4-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `PGPLOT/5.2.2-GCCcore-11.3.0.lua` `pkg-config/0.29.2-GCCcore-11.3.0.lua` `WCSLIB/7.11-GCC-11.3.0.lua` `wget/1.21.3-GCCcore-11.3.0.lua` `WSClean/3.4-foss-2022a.lua` software under 2023.06/software/linux/aarch64/neoverse_v1/software `AOFlagger/3.4.0-foss-2022a` `Armadillo/11.4.3-foss-2022a` `arpack-ng/3.8.0-foss-2022a` `Boost/1.79.0-GCC-11.3.0` `Boost.Python/1.79.0-GCC-11.3.0` `casacore/3.5.0-foss-2022a` `CFITSIO/4.2.0-GCCcore-11.3.0` `CMake/3.24.3-GCCcore-11.3.0` `DP3/6.0-foss-2022a` `EveryBeam/0.5.2-foss-2022a` `libidn2/2.3.2-GCCcore-11.3.0` `Lua/5.4.4-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `PGPLOT/5.2.2-GCCcore-11.3.0` `pkg-config/0.29.2-GCCcore-11.3.0` `WCSLIB/7.11-GCC-11.3.0` `wget/1.21.3-GCCcore-11.3.0` `WSClean/3.4-foss-2022a` other under 2023.06/software/linux/aarch64/neoverse_v1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 01 07:44:58 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_v1-1698780525.tar.gz` to S3 bucket succeeded

Changes made

ocaisa · 2023-11-01T14:27:15Z

@t1mk1k This is now ingested and available, thanks for your patience!

…od-hook-when-building don't check for GPU driver libs when building

Add DP3-6.0-foss-2022a and WSClean-3.4-foss-2022a

3be4823

casparvl mentioned this pull request Oct 24, 2023

{2023.06}[foss/2022a] matplotlib v3.5.2 #362

Merged

t1mk1k changed the title ~~{2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4~~ {2023.06}[foss/2022a] EasyBuild v4.8.2 + DP3 6.0 and WSClean 3.4 Oct 30, 2023

Tim Kok added 2 commits October 30, 2023 10:56

Add EasyBuild v4.8.2

207fb71

Add EasyBuild v4.8.2

1083078

Tim Kok added 2 commits October 30, 2023 11:23

Add EasyBuild 4.8.2 to 4.8.1 system file

e2644fa

Remove EasyBuild 4.8.2 from 4.8.0 system file

eb503d9

ocaisa mentioned this pull request Oct 31, 2023

Remove Lua from filtered dependencies #377

Closed

Include casacore and EveryBeam from PR 19119

31894ec

ocaisa approved these changes Oct 31, 2023

View reviewed changes

ocaisa added the ready-to-deploy Mark a PR as ready to deploy label Oct 31, 2023

ocaisa added the bot:deploy Ask bot to deploy missing software installations to EESSI label Nov 1, 2023

ocaisa mentioned this pull request Nov 1, 2023

Easystack files not resolving dependencies from PR #378

Open

ocaisa merged commit 60ccab9 into EESSI:2023.06 Nov 1, 2023
33 checks passed

boegel mentioned this pull request Nov 9, 2023

{2023.06} don't filter Lua dependency (and reinstall gnuplot/5.4.2-GCCcore-11.2.0) #380

Merged

TopRichard mentioned this pull request Jan 18, 2024

{2023.06}[GCCcore/11.3.0] gnuplot v5.4.4 NorESSI/software-layer#230

Closed

trz42 pushed a commit to trz42/software-layer that referenced this pull request May 23, 2024

Merge pull request EESSI#370 from trz42/nessi-2023.06-skip-haveGPU-Lm…

82d7f38

…od-hook-when-building don't check for GPU driver libs when building

{2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370

{2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370

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