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Switch setup configuration to to `pyproject.toml` #942

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Run time

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Job	Run time
lint with pre-commit	39s
test polaris - python 3.9	5m 40s
test polaris - python 3.10	5m 46s
test polaris - python 3.11	5m 44s
test polaris - python 3.12	5m 36s
	23m 25s