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fix: switch forgotten instances of Cruise -> Crispin
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kelly-sovacool authored May 23, 2024
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# CRISPIN 🍪

**C**rispr sc**R**een seq**U**encIng analy**S**is pip**E**line
Crispr screen sequencing analysis pipeline

🚧 **This project is under active development. It is not yet ready for production use.** 🚧

[![build](https://github.com/CCBR/CRISPIN/actions/workflows/build.yml/badge.svg)](https://github.com/CCBR/CRISPIN/actions/workflows/build.yml)

## Set up

Cruise is installed on the [Biowulf HPC](#biowulf).
CRISPIN is installed on the [Biowulf HPC](#biowulf).
For installation in other execution environments,
refer to the [docs](https://ccbr.github.io/crispin).

### Biowulf

Cruise is available on [Biowulf](https://hpc.nih.gov/) in the `ccbrpipeliner` module.
CRISPIN is available on [Biowulf](https://hpc.nih.gov/) in the `ccbrpipeliner` module.
You'll first need to start an interactive session and create a directory from where you'll run crispin.

```sh
Expand All @@ -40,7 +40,7 @@ crispin run --mode local -profile test -preview
crispin run --mode slurm -profile test,biowulf
```

To run crispin on your own data, you'll need to create a sample sheet.
To run CRISPIN on your own data, you'll need to create a sample sheet.
Take a look at the example:
[assets/samplesheet_test_biowulf.csv](assets/samplesheet_test_biowulf.csv).

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