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Use naive hash fallback for BioSequence #244

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merged 1 commit into from
Jul 5, 2022
Merged

Use naive hash fallback for BioSequence #244

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2 changes: 1 addition & 1 deletion Project.toml
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
name = "BioSequences"
uuid = "7e6ae17a-c86d-528c-b3b9-7f778a29fe59"
authors = ["Sabrina Jaye Ward <[email protected]>", "Jakob Nissen <[email protected]>"]
version = "3.0.1"
version = "3.0.2"

[deps]
BioSymbols = "3c28c6f8-a34d-59c4-9654-267d177fcfa9"
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1 change: 1 addition & 0 deletions src/biosequence/biosequence.jl
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Expand Up @@ -93,6 +93,7 @@ Base.isempty(x::BioSequence) = iszero(length(x))
Base.empty(::Type{T}) where {T <: BioSequence} = T(eltype(T)[])
Base.empty(x::BioSequence) = empty(typeof(x))
BitsPerSymbol(x::BioSequence) = BitsPerSymbol(Alphabet(typeof(x)))
Base.hash(s::BioSequence, x::UInt) = foldl((a, b) -> hash(b, a), s, init=x)

function Base.similar(seq::BioSequence, len::Integer=length(seq))
return typeof(seq)(undef, len)
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3 changes: 3 additions & 0 deletions src/longsequences/hash.jl
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Expand Up @@ -15,6 +15,8 @@
### This file is a part of BioJulia.
### License is MIT: https://github.com/BioJulia/BioSequences.jl/blob/master/LICENSE.md

# NB NOTE: This entire file is commented out until issue #243 is resolved
#=
const c1 = 0x87c37b91114253d5
const c2 = 0x4cf5ad432745937f

Expand Down Expand Up @@ -173,3 +175,4 @@ function Base.hash(seq::SeqOrView, seed::UInt64)

return h1
end
=#