GitHub - zshivji/synthetic_protein_landscapes: Generates synthetic protein landscapes and compares them to real landscapes

zshivji / synthetic_protein_landscapes Public

Generates synthetic protein landscapes and compares them to real landscapes

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Name		Name	Last commit message	Last commit date
Latest commit History 15 Commits
Data		Data
DeCOIL		DeCOIL
mutation-predictability		mutation-predictability
slip		slip
0_preprocessing_MLDE_lite.ipynb		0_preprocessing_MLDE_lite.ipynb
1_potts_model.ipynb		1_potts_model.ipynb
2_generate_synthetic_landscape.ipynb		2_generate_synthetic_landscape.ipynb
3a_DE_Simulations.ipynb		3a_DE_Simulations.ipynb
3b_pairwise_epistasis.ipynb		3b_pairwise_epistasis.ipynb
3c_MLDE_analysis.ipynb		3c_MLDE_analysis.ipynb
potts_model.py		potts_model.py