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zhangrengang
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,211 @@ | ||
| name: OrthoIndex | ||
| channels: | ||
| - conda-forge | ||
| - bioconda | ||
| dependencies: | ||
| - _libgcc_mutex=0.1 | ||
| - _openmp_mutex=4.5 | ||
| - alsa-lib=1.2.3.2 | ||
| - aria2=1.36.0 | ||
| - biopython=1.81 | ||
| - blast=2.14.1 | ||
| - brotli=1.1.0 | ||
| - brotli-bin=1.1.0 | ||
| - brotli-python=1.1.0 | ||
| - bzip2=1.0.8 | ||
| - c-ares=1.19.1 | ||
| - ca-certificates=2023.7.22 | ||
| - certifi=2023.7.22 | ||
| - charset-normalizer=3.2.0 | ||
| - contourpy=1.1.1 | ||
| - curl=7.86.0 | ||
| - cycler=0.11.0 | ||
| - dbus=1.13.6 | ||
| - diamond=2.1.8 | ||
| - divvier=1.01 | ||
| - drmaa=0.7.9 | ||
| - entrez-direct=16.2 | ||
| - expat=2.5.0 | ||
| - fastme=2.1.6.1 | ||
| - fasttree=2.1.11 | ||
| - fontconfig=2.14.2 | ||
| - fonttools=4.42.1 | ||
| - freetype=2.12.1 | ||
| - gawk=5.1.0 | ||
| - gettext=0.21.1 | ||
| - glib=2.68.4 | ||
| - glib-tools=2.68.4 | ||
| - gmp=6.2.1 | ||
| - gst-plugins-base=1.18.5 | ||
| - gstreamer=1.18.5 | ||
| - icu=68.2 | ||
| - idna=3.4 | ||
| - importlib-resources=6.0.1 | ||
| - importlib_resources=6.0.1 | ||
| - iqtree=2.2.5 | ||
| - jpeg=9e | ||
| - keyutils=1.6.1 | ||
| - kiwisolver=1.4.5 | ||
| - krb5=1.19.3 | ||
| - lazy-property=0.0.1 | ||
| - lcms2=2.15 | ||
| - ld_impl_linux-64=2.40 | ||
| - lerc=4.0.0 | ||
| - libblas=3.9.0 | ||
| - libbrotlicommon=1.1.0 | ||
| - libbrotlidec=1.1.0 | ||
| - libbrotlienc=1.1.0 | ||
| - libcblas=3.9.0 | ||
| - libclang=11.1.0 | ||
| - libcurl=7.86.0 | ||
| - libdeflate=1.17 | ||
| - libedit=3.1.20191231 | ||
| - libev=4.33 | ||
| - libevent=2.1.10 | ||
| - libexpat=2.5.0 | ||
| - libffi=3.3 | ||
| - libgcc-ng=13.2.0 | ||
| - libgfortran-ng=13.2.0 | ||
| - libgfortran5=13.2.0 | ||
| - libglib=2.68.4 | ||
| - libgomp=13.2.0 | ||
| - libiconv=1.17 | ||
| - libidn2=2.3.4 | ||
| - liblapack=3.9.0 | ||
| - libllvm11=11.1.0 | ||
| - libnghttp2=1.51.0 | ||
| - libnsl=2.0.0 | ||
| - libogg=1.3.4 | ||
| - libopenblas=0.3.24 | ||
| - libopus=1.3.1 | ||
| - libpng=1.6.39 | ||
| - libpq=13.8 | ||
| - libsqlite=3.43.0 | ||
| - libssh2=1.10.0 | ||
| - libstdcxx-ng=13.2.0 | ||
| - libtiff=4.5.0 | ||
| - libunistring=0.9.10 | ||
| - libuuid=2.38.1 | ||
| - libvorbis=1.3.7 | ||
| - libwebp-base=1.3.2 | ||
| - libxcb=1.13 | ||
| - libxkbcommon=1.0.3 | ||
| - libxml2=2.9.12 | ||
| - libzlib=1.2.13 | ||
| - mafft=7.520 | ||
| - matplotlib=3.7.2 | ||
| - matplotlib-base=3.7.2 | ||
| - mcl=22.282 | ||
| - mmseqs2=14.7e284 | ||
| - mpi=1.0 | ||
| - munkres=1.1.4 | ||
| - muscle=3.8.1551 | ||
| - mysql-common=8.0.32 | ||
| - mysql-libs=8.0.32 | ||
| - ncbi-vdb=3.0.7 | ||
| - ncurses=6.4 | ||
| - networkx=3.1 | ||
| - newick_utils=1.6 | ||
| - nspr=4.35 | ||
| - nss=3.92 | ||
| - numpy=1.24.4 | ||
| - openjpeg=2.5.0 | ||
| - openmpi=4.1.5 | ||
| - openssl=1.1.1w | ||
| - orthofinder=2.5.5 | ||
| - ossuuid=1.6.2 | ||
| - packaging=23.1 | ||
| - pal2nal=14.1 | ||
| - paml=4.10.6 | ||
| - pandas=2.0.3 | ||
| - pcre=8.45 | ||
| - perl=5.32.1 | ||
| - perl-alien-build=2.48 | ||
| - perl-alien-libxml2=0.17 | ||
| - perl-archive-tar=2.40 | ||
| - perl-business-isbn=3.007 | ||
| - perl-business-isbn-data=20210112.006 | ||
| - perl-capture-tiny=0.48 | ||
| - perl-carp=1.50 | ||
| - perl-common-sense=3.75 | ||
| - perl-compress-raw-bzip2=2.201 | ||
| - perl-compress-raw-zlib=2.202 | ||
| - perl-constant=1.33 | ||
| - perl-encode=3.19 | ||
| - perl-exporter=5.74 | ||
| - perl-exporter-tiny=1.002002 | ||
| - perl-extutils-makemaker=7.70 | ||
| - perl-ffi-checklib=0.28 | ||
| - perl-file-chdir=0.1011 | ||
| - perl-file-path=2.18 | ||
| - perl-file-temp=0.2304 | ||
| - perl-file-which=1.24 | ||
| - perl-getopt-long=2.54 | ||
| - perl-importer=0.026 | ||
| - perl-io-compress=2.201 | ||
| - perl-io-zlib=1.14 | ||
| - perl-json=4.10 | ||
| - perl-json-xs=2.34 | ||
| - perl-list-moreutils=0.430 | ||
| - perl-list-moreutils-xs=0.430 | ||
| - perl-parent=0.241 | ||
| - perl-path-tiny=0.124 | ||
| - perl-pathtools=3.75 | ||
| - perl-scalar-list-utils=1.63 | ||
| - perl-scope-guard=0.21 | ||
| - perl-storable=3.15 | ||
| - perl-sub-info=0.002 | ||
| - perl-term-table=0.016 | ||
| - perl-test-fatal=0.016 | ||
| - perl-test-warnings=0.031 | ||
| - perl-test2-suite=0.000145 | ||
| - perl-try-tiny=0.31 | ||
| - perl-types-serialiser=1.01 | ||
| - perl-uri=5.17 | ||
| - perl-xml-libxml=2.0207 | ||
| - perl-xml-namespacesupport=1.12 | ||
| - perl-xml-sax=1.02 | ||
| - perl-xml-sax-base=1.09 | ||
| - pillow=9.4.0 | ||
| - pip=23.2.1 | ||
| - platformdirs=3.10.0 | ||
| - pooch=1.7.0 | ||
| - psutil=5.9.5 | ||
| - pthread-stubs=0.4 | ||
| - pyparsing=3.0.9 | ||
| - pyqt=5.12.3 | ||
| - pyqt-impl=5.12.3 | ||
| - pyqt5-sip=4.19.18 | ||
| - pyqtchart=5.12 | ||
| - pyqtwebengine=5.12.1 | ||
| - pysocks=1.7.1 | ||
| - python=3.8.8 | ||
| - python-dateutil=2.8.2 | ||
| - python-tzdata=2023.3 | ||
| - python_abi=3.8 | ||
| - pytz=2023.3.post1 | ||
| - qt=5.12.9 | ||
| - raxml=8.2.12 | ||
| - raxml-ng=1.2.0 | ||
| - readline=8.2 | ||
| - requests=2.31.0 | ||
| - scipy=1.10.1 | ||
| - setuptools=68.2.2 | ||
| - six=1.16.0 | ||
| - sqlite=3.43.0 | ||
| - tk=8.6.12 | ||
| - tornado=6.3.3 | ||
| - trimal=1.4.1 | ||
| - typing-extensions=4.7.1 | ||
| - typing_extensions=4.7.1 | ||
| - unicodedata2=15.0.0 | ||
| - urllib3=2.0.4 | ||
| - wgdi=0.6.5 | ||
| - wget=1.20.3 | ||
| - wheel=0.41.2 | ||
| - xorg-libxau=1.0.11 | ||
| - xorg-libxdmcp=1.1.3 | ||
| - xz=5.2.6 | ||
| - zipp=3.16.2 | ||
| - zlib=1.2.13 | ||
| - zstd=1.5.5 |
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