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26 Open 57 Closed
26 Open 57 Closed
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Issues list

feat: modify ASCII-style alignment pileups aesthetics enhancement New feature or request
#145 opened Aug 18, 2024 by deliaBlue
@deliaBlue
1
fix: classify correctly mature miRNA bug Something isn't working high priority
#143 opened May 7, 2024 by deliaBlue
1
@deliaBlue
feat: write a custom collapsing script low priority
#128 opened Dec 2, 2023 by deliaBlue
Re-organize the repository low priority
#119 opened Nov 10, 2023 by deliaBlue
build: check sub-environment r.yaml low priority
#117 opened Nov 4, 2023 by deliaBlue
1
docs: add contributing guidelines documentation Improvements or additions to documentation
#107 opened Sep 16, 2023 by deliaBlue
8 tasks
docs: migrate documentation to Read the Docs (or similar) documentation Improvements or additions to documentation
#106 opened Sep 16, 2023 by deliaBlue
docs: create API documentation for the scripts documentation Improvements or additions to documentation
#105 opened Sep 16, 2023 by deliaBlue
refactor: improve legacy scripts low priority refactor
#104 opened Sep 16, 2023 by deliaBlue
1 of 3 tasks
@deliaBlue
feat: add versioning, changelog and release notes enhancement New feature or request
#103 opened Sep 16, 2023 by deliaBlue
4 tasks
Add configuration profiles design
#95 opened Jun 29, 2023 by deliaBlue
refactor: merge tables with more than 2 fields refactor
#87 opened May 24, 2023 by deliaBlue
Use module to turn SAM files into BAM files design low priority refactor
#83 opened May 17, 2023 by deliaBlue
@deliaBlue
upload coverage report on codecov
#74 opened Apr 28, 2023 by deliaBlue
create unit tests
#63 opened Apr 12, 2023 by deliaBlue
3 of 11 tasks
create unit tests for sam_uncollapse.pl low priority
#62 opened Apr 12, 2023 by deliaBlue
create unit tests for sam_trx_to_sam_gen.pl low priority
#61 opened Apr 12, 2023 by deliaBlue
create unit tests for nh_filter.py low priority
#60 opened Apr 12, 2023 by deliaBlue
@deliaBlue
create unit tests for sam_remove_duplicates_inferior_alignments_multimappers.1_7.pl low priority
#59 opened Apr 12, 2023 by deliaBlue
create unit tests for merge_tables.R low priority
#58 opened Apr 12, 2023 by deliaBlue
create unit tests for map_chromosomes.pl low priority
#57 opened Apr 12, 2023 by deliaBlue
create unit tests for get_exons_bed.1.1.2.R low priority
#56 opened Apr 12, 2023 by deliaBlue
create unit tests for validation_fasta.py low priority
#55 opened Apr 12, 2023 by deliaBlue
Contribute with BioConductor image(s) for R and/or tidyverse with optparse low priority
#35 opened Mar 18, 2023 by deliaBlue
Cached Docker images in GitHub Action
#23 opened Mar 12, 2023 by deliaBlue
1
ProTip! Exclude everything labeled bug with -label:bug.