project-subdividing-the-thalamus

Code related to our paper on structural covariance between the thalamus and cortex

Getting started

1. Install requirements
2. Clone this repository
3. Get data resources

Code

Data processing and analysis steps are contained within code/run.sh. Although file extension corresponds to a shell script, it is not recommended that this file be executed -- it contains bits of code that are optional, and also describes code that needs to be run on a cluster. The script is therefore meant to be a guide on the processing steps used to generate the results in the paper, and each step within should be executed sequentially instead, with output manually scrutinized.