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Add bioformats support for file loading
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jmuhlich committed Mar 21, 2024
1 parent 76c3b68 commit b5e17d8
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -12,7 +12,7 @@ ENV PATH=/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:
# Installing necessary packages

# Installing basicpy and other pip packages
RUN pip --no-cache-dir install git+https://github.com/peng-lab/BaSiCpy@dev
RUN pip --no-cache-dir install git+https://github.com/peng-lab/BaSiCpy@dev bioformats_jar

# Copy script and test run
COPY ./main.py /opt/
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