Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[ENH] Seeding on the white matter-gray mattter interface #1096

Open
wants to merge 1 commit into
base: master
Choose a base branch
from

Conversation

36000
Copy link
Collaborator

@36000 36000 commented Jan 27, 2024

Here is a first attempt at seeding in the gray matter white matter interface using hidden Markov Random Field models (as implemented in DIPY) on slightly modified anisotropic power maps (no T1 needed). I also set this as the default seeding to see which tests it would throw

image image
Screen.Recording.2024-01-27.at.11.38.56.AM.mov

There are some other minor bug fixes in here:
Fix IFOF color scheme
Throw warning and exit in apply_cmd_to_afq_derivs if you are trying to clobber() a directory that doesnt exist yet

@36000
Copy link
Collaborator Author

36000 commented Mar 25, 2024

Should consider trying this instead: #418

@36000
Copy link
Collaborator Author

36000 commented Apr 22, 2024

Or use #1129

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant