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adds missing files for quibl
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@roddypr
roddypr committed Jan 24, 2022
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1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/10177at7399.raxml.bestTree
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((((SRR9008163_inv-225-Mis-littleb:0.001111,(SRR9008167_meg-127-BZ-littleb:0.000849,GCa8-9-littleb-p:0.000755):0.000121):0.000153,GCa3-9-littleb-p:0.000728):0.000242,SRR9008136_ric-74-Ros-littleb:0.000353):0.000182,(((((((GCa3-11-bigB-p:0.000724,SRR9008214_meg-130-BZ-bigB:0.000650):0.001244,(SRR9008158_sae-47-Bel-bigB:0.004169,SRR9008217_int-122-Car-bigB:0.002358):0.000468):0.000199,SRR9008197_ric-96-Ros-bigB:0.002319):0.000541,SRR9008232_xAdR-134-Bra-bigB:0.002409):0.000253,(gem-1-bigB-m-majorityallele:0.006811,Lad4-1-bigB-m-majorityallele:0.004605):0.001466):0.000449,SRR9008275_inv-223-Cor-bigB:0.002222):0.000647,SRR9008168_xAdR-135-Pos-littleb:0.001423):0.000718,(SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.001239):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/10600at7399.raxml.bestTree
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(SRR9008163_inv-225-Mis-littleb:0.000383,(SRR9008136_ric-74-Ros-littleb:0.000924,(((SRR9008197_ric-96-Ros-bigB:0.001386,((GCa3-11-bigB-p:0.000552,SRR9008214_meg-130-BZ-bigB:0.000404):0.000274,((((SRR9008158_sae-47-Bel-bigB:0.002462,gem-1-bigB-m-majorityallele:0.006664):0.000794,Lad4-1-bigB-m-majorityallele:0.002734):0.001537,((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000139,SRR9008217_int-122-Car-bigB:0.000269):0.001516):0.000099,SRR9008232_xAdR-134-Bra-bigB:0.002191):0.000486):0.000406):0.000125,SRR9008275_inv-223-Cor-bigB:0.000544):0.000259,((GCa3-9-littleb-p:0.000144,GCa8-9-littleb-p:0.000404):0.000555,SRR9008167_meg-127-BZ-littleb:0.001099):0.000152):0.000578):0.000570,SRR9008168_xAdR-135-Pos-littleb:0.000302):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/10654at7399.raxml.bestTree
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(SRR9008136_ric-74-Ros-littleb:0.000201,((((SRR9008163_inv-225-Mis-littleb:0.000391,(SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000355):0.000095,GCa8-9-littleb-p:0.000441):0.000516,(SRR9008275_inv-223-Cor-bigB:0.001411,(((SRR9008232_xAdR-134-Bra-bigB:0.001125,SRR9008168_xAdR-135-Pos-littleb:0.001346):0.000640,(((gem-1-bigB-m-majorityallele:0.005603,Lad4-1-bigB-m-majorityallele:0.003584):0.001160,SRR9008158_sae-47-Bel-bigB:0.002445):0.000274,(SRR9008214_meg-130-BZ-bigB:0.000918,GCa3-11-bigB-p:0.001120):0.001120):0.000204):0.000344,(SRR9008197_ric-96-Ros-bigB:0.001630,SRR9008217_int-122-Car-bigB:0.001663):0.000445):0.000295):0.001088):0.000641,GCa3-9-littleb-p:0.000207):0.000778,SRR9008167_meg-127-BZ-littleb:0.000089):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/11817at7399.raxml.bestTree
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(SRR9008136_ric-74-Ros-littleb:0.000201,((((SRR9008163_inv-225-Mis-littleb:0.000391,(SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000355):0.000095,GCa8-9-littleb-p:0.000441):0.000516,(SRR9008275_inv-223-Cor-bigB:0.001411,(((SRR9008232_xAdR-134-Bra-bigB:0.001125,SRR9008168_xAdR-135-Pos-littleb:0.001346):0.000640,(((gem-1-bigB-m-majorityallele:0.005603,Lad4-1-bigB-m-majorityallele:0.003584):0.001160,SRR9008158_sae-47-Bel-bigB:0.002445):0.000274,(SRR9008214_meg-130-BZ-bigB:0.000918,GCa3-11-bigB-p:0.001120):0.001120):0.000204):0.000344,(SRR9008197_ric-96-Ros-bigB:0.001630,SRR9008217_int-122-Car-bigB:0.001663):0.000445):0.000295):0.001088):0.000641,GCa3-9-littleb-p:0.000207):0.000778,SRR9008167_meg-127-BZ-littleb:0.000089):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/11872at7399.raxml.bestTree
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((SRR9008275_inv-223-Cor-bigB:0.000275,(((SRR9008232_xAdR-134-Bra-bigB:0.001518,(((SRR9008168_xAdR-135-Pos-littleb:0.000425,SRR9008163_inv-225-Mis-littleb:0.000842):0.000716,(((SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000001):0.001276,SRR9008136_ric-74-Ros-littleb:0.000545):0.000182,SRR9008167_meg-127-BZ-littleb:0.000367):0.000675):0.001888,((Lad4-1-bigB-m-majorityallele:0.004722,gem-1-bigB-m-majorityallele:0.004939):0.001164,SRR9008158_sae-47-Bel-bigB:0.003321):0.000365):0.000625):0.000113,(SRR9008214_meg-130-BZ-bigB:0.000911,GCa3-11-bigB-p:0.000731):0.001822):0.000169,SRR9008217_int-122-Car-bigB:0.002379):0.000457):0.000359,SRR9008197_ric-96-Ros-bigB:0.000633,(GCa3-9-littleb-p:0.000001,GCa8-9-littleb-p:0.000541):0.000454):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/1235at7399.raxml.bestTree
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(((SRR9008197_ric-96-Ros-bigB:0.002193,(((gem-1-bigB-m-majorityallele:0.007545,Lad4-1-bigB-m-majorityallele:0.004944):0.001289,SRR9008158_sae-47-Bel-bigB:0.003106):0.000640,SRR9008217_int-122-Car-bigB:0.002033):0.000227):0.000306,((((SRR9008166_int-125-Car-littleb:0.000054,SRR9008118_int-124-Car-littleb:0.000001):0.001213,SRR9008136_ric-74-Ros-littleb:0.001413):0.000300,(SRR9008167_meg-127-BZ-littleb:0.000947,(SRR9008163_inv-225-Mis-littleb:0.001002,(GCa8-9-littleb-p:0.000353,GCa3-9-littleb-p:0.000359):0.001275):0.000417):0.000199):0.001824,((SRR9008232_xAdR-134-Bra-bigB:0.001204,SRR9008168_xAdR-135-Pos-littleb:0.000697):0.000911,SRR9008275_inv-223-Cor-bigB:0.001681):0.000291):0.000157):0.001055,GCa3-11-bigB-p:0.000519,SRR9008214_meg-130-BZ-bigB:0.000544):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/13232at7399.raxml.bestTree
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((((SRR9008275_inv-223-Cor-bigB:0.000333,SRR9008197_ric-96-Ros-bigB:0.000394):0.000135,SRR9008214_meg-130-BZ-bigB:0.000356):0.000014,((SRR9008158_sae-47-Bel-bigB:0.000493,(gem-1-bigB-m-majorityallele:0.001606,Lad4-1-bigB-m-majorityallele:0.000876):0.000274):0.000142,(GCa3-11-bigB-p:0.000274,((SRR9008168_xAdR-135-Pos-littleb:0.000265,(SRR9008136_ric-74-Ros-littleb:0.000051,(GCa8-9-littleb-p:0.000070,GCa3-9-littleb-p:0.000086):0.000141):0.000107):0.000107,(((SRR9008166_int-125-Car-littleb:0.000012,SRR9008118_int-124-Car-littleb:0.000012):0.000029,SRR9008167_meg-127-BZ-littleb:0.000080):0.000137,SRR9008163_inv-225-Mis-littleb:0.000173):0.000145):0.000242):0.000248):0.000071):0.000056,SRR9008232_xAdR-134-Bra-bigB:0.000337,SRR9008217_int-122-Car-bigB:0.000346):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/13350at7399.raxml.bestTree
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((SRR9008168_xAdR-135-Pos-littleb:0.000344,(SRR9008136_ric-74-Ros-littleb:0.000364,(GCa8-9-littleb-p:0.001013,((SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000001):0.001999,(GCa3-9-littleb-p:0.000941,(SRR9008275_inv-223-Cor-bigB:0.002016,(SRR9008232_xAdR-134-Bra-bigB:0.001325,((((SRR9008214_meg-130-BZ-bigB:0.000440,GCa3-11-bigB-p:0.000080):0.000926,SRR9008217_int-122-Car-bigB:0.001687):0.000486,SRR9008197_ric-96-Ros-bigB:0.001800):0.001061,(SRR9008158_sae-47-Bel-bigB:0.002730,(gem-1-bigB-m-majorityallele:0.005145,Lad4-1-bigB-m-majorityallele:0.003332):0.000125):0.000390):0.000402):0.000275):0.001130):0.000625):0.000391):0.000248):0.000504):0.000001,SRR9008167_meg-127-BZ-littleb:0.000258,SRR9008163_inv-225-Mis-littleb:0.000172):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/133at7399.raxml.bestTree
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(((SRR9008232_xAdR-134-Bra-bigB:0.001088,(SRR9008275_inv-223-Cor-bigB:0.001463,SRR9008197_ric-96-Ros-bigB:0.000824):0.000318):0.000291,(SRR9008214_meg-130-BZ-bigB:0.000160,GCa3-11-bigB-p:0.000111):0.000829):0.000427,(SRR9008168_xAdR-135-Pos-littleb:0.000654,(((SRR9008167_meg-127-BZ-littleb:0.000706,(SRR9008136_ric-74-Ros-littleb:0.000328,(GCa3-9-littleb-p:0.000164,GCa8-9-littleb-p:0.000219):0.000386):0.000339):0.000171,(SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000001):0.000636):0.000070,SRR9008163_inv-225-Mis-littleb:0.000659):0.000205):0.001338,(SRR9008217_int-122-Car-bigB:0.001261,(SRR9008158_sae-47-Bel-bigB:0.003075,(Lad4-1-bigB-m-majorityallele:0.003936,gem-1-bigB-m-majorityallele:0.005826):0.000355):0.001842):0.000354):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/1355at7399.raxml.bestTree
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(((((GCa3-9-littleb-p:0.000168,GCa8-9-littleb-p:0.000170):0.000425,SRR9008136_ric-74-Ros-littleb:0.000681):0.000082,((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000084,SRR9008163_inv-225-Mis-littleb:0.000084):0.000085):0.000353,SRR9008168_xAdR-135-Pos-littleb:0.000579):0.000592,((SRR9008158_sae-47-Bel-bigB:0.002044,(gem-1-bigB-m-majorityallele:0.003978,Lad4-1-bigB-m-majorityallele:0.004003):0.000991):0.000249,(((SRR9008214_meg-130-BZ-bigB:0.000339,GCa3-11-bigB-p:0.000254):0.001365,SRR9008232_xAdR-134-Bra-bigB:0.000773):0.000329,SRR9008167_meg-127-BZ-littleb:0.002305):0.000425):0.000100,(SRR9008217_int-122-Car-bigB:0.001189,(SRR9008275_inv-223-Cor-bigB:0.000168,SRR9008197_ric-96-Ros-bigB:0.000764):0.000597):0.000318):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/1363at7399.raxml.bestTree
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((((SRR9008167_meg-127-BZ-littleb:0.000186,(SRR9008214_meg-130-BZ-bigB:0.000067,GCa3-11-bigB-p:0.000093):0.000139):0.000050,SRR9008232_xAdR-134-Bra-bigB:0.000197):0.000045,((((SRR9008217_int-122-Car-bigB:0.000113,(SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000177):0.000152,(SRR9008158_sae-47-Bel-bigB:0.000301,(gem-1-bigB-m-majorityallele:0.000584,Lad4-1-bigB-m-majorityallele:0.000389):0.000080):0.000063):0.000034,SRR9008197_ric-96-Ros-bigB:0.000199):0.000035,SRR9008275_inv-223-Cor-bigB:0.000187):0.000020):0.000108,SRR9008168_xAdR-135-Pos-littleb:0.000086,((SRR9008136_ric-74-Ros-littleb:0.000184,GCa8-9-littleb-p:0.000134):0.000019,(SRR9008163_inv-225-Mis-littleb:0.000102,GCa3-9-littleb-p:0.000071):0.000039):0.000074):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/13801at7399.raxml.bestTree
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((((SRR9008275_inv-223-Cor-bigB:0.000333,SRR9008197_ric-96-Ros-bigB:0.000394):0.000135,SRR9008214_meg-130-BZ-bigB:0.000356):0.000014,((SRR9008158_sae-47-Bel-bigB:0.000493,(gem-1-bigB-m-majorityallele:0.001606,Lad4-1-bigB-m-majorityallele:0.000876):0.000274):0.000142,(GCa3-11-bigB-p:0.000274,((SRR9008168_xAdR-135-Pos-littleb:0.000265,(SRR9008136_ric-74-Ros-littleb:0.000051,(GCa8-9-littleb-p:0.000070,GCa3-9-littleb-p:0.000086):0.000141):0.000107):0.000107,(((SRR9008166_int-125-Car-littleb:0.000012,SRR9008118_int-124-Car-littleb:0.000012):0.000029,SRR9008167_meg-127-BZ-littleb:0.000080):0.000137,SRR9008163_inv-225-Mis-littleb:0.000173):0.000145):0.000242):0.000248):0.000071):0.000056,SRR9008232_xAdR-134-Bra-bigB:0.000337,SRR9008217_int-122-Car-bigB:0.000346):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/14031at7399.raxml.bestTree
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(GCa3-11-bigB-p:0.000778,((SRR9008232_xAdR-134-Bra-bigB:0.001968,((SRR9008197_ric-96-Ros-bigB:0.001136,SRR9008275_inv-223-Cor-bigB:0.000433):0.000326,((((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.001077,(SRR9008163_inv-225-Mis-littleb:0.000283,SRR9008168_xAdR-135-Pos-littleb:0.000714):0.000666):0.000124,(GCa3-9-littleb-p:0.000424,GCa8-9-littleb-p:0.000001):0.000780):0.000748,(SRR9008136_ric-74-Ros-littleb:0.002737,SRR9008167_meg-127-BZ-littleb:0.000690):0.000105):0.001008):0.000295):0.000395,(SRR9008217_int-122-Car-bigB:0.002938,(SRR9008158_sae-47-Bel-bigB:0.003237,(Lad4-1-bigB-m-majorityallele:0.003012,gem-1-bigB-m-majorityallele:0.005517):0.000952):0.000435):0.000393):0.001422,SRR9008214_meg-130-BZ-bigB:0.000655):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/14657at7399.raxml.bestTree
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((SRR9008168_xAdR-135-Pos-littleb:0.000836,((((SRR9008197_ric-96-Ros-bigB:0.001792,SRR9008217_int-122-Car-bigB:0.003146):0.000749,(SRR9008232_xAdR-134-Bra-bigB:0.002574,SRR9008214_meg-130-BZ-bigB:0.001888):0.000789):0.000611,((SRR9008158_sae-47-Bel-bigB:0.004279,(gem-1-bigB-m-majorityallele:0.006014,Lad4-1-bigB-m-majorityallele:0.005406):0.000938):0.000608,(GCa3-11-bigB-p:0.001289,SRR9008275_inv-223-Cor-bigB:0.001962):0.000702):0.000139):0.001920,SRR9008167_meg-127-BZ-littleb:0.000422):0.000293):0.000001,(GCa8-9-littleb-p:0.000843,SRR9008163_inv-225-Mis-littleb:0.000604):0.000112,((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000118,(SRR9008136_ric-74-Ros-littleb:0.000120,GCa3-9-littleb-p:0.000717):0.000117):0.000001):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/1469at7399.raxml.bestTree
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(GCa8-9-littleb-p:0.000597,(((SRR9008167_meg-127-BZ-littleb:0.000872,SRR9008136_ric-74-Ros-littleb:0.001142):0.000413,(((SRR9008232_xAdR-134-Bra-bigB:0.001282,((gem-1-bigB-m-majorityallele:0.006899,Lad4-1-bigB-m-majorityallele:0.004436):0.000361,SRR9008158_sae-47-Bel-bigB:0.002578):0.000296):0.000202,((SRR9008214_meg-130-BZ-bigB:0.000916,GCa3-11-bigB-p:0.000264):0.001135,SRR9008275_inv-223-Cor-bigB:0.001565):0.000389):0.000100,(SRR9008197_ric-96-Ros-bigB:0.001994,SRR9008217_int-122-Car-bigB:0.001133):0.000192):0.000368):0.000226,(((SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000001):0.000551,SRR9008163_inv-225-Mis-littleb:0.000460):0.000740,SRR9008168_xAdR-135-Pos-littleb:0.000571):0.000130):0.000389,GCa3-9-littleb-p:0.000582):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/14784at7399.raxml.bestTree
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(((((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000188,SRR9008163_inv-225-Mis-littleb:0.000213):0.000084,SRR9008168_xAdR-135-Pos-littleb:0.000232):0.000107,SRR9008167_meg-127-BZ-littleb:0.000574):0.000219,(((SRR9008158_sae-47-Bel-bigB:0.001673,(Lad4-1-bigB-m-majorityallele:0.002518,gem-1-bigB-m-majorityallele:0.003557):0.000455):0.000457,((SRR9008197_ric-96-Ros-bigB:0.001048,(SRR9008275_inv-223-Cor-bigB:0.000729,((GCa3-11-bigB-p:0.000432,SRR9008214_meg-130-BZ-bigB:0.000403):0.000617,SRR9008232_xAdR-134-Bra-bigB:0.000934):0.000197):0.000080):0.000189,SRR9008217_int-122-Car-bigB:0.000819):0.000255):0.000645,GCa3-9-littleb-p:0.000318):0.000124,(SRR9008136_ric-74-Ros-littleb:0.000566,GCa8-9-littleb-p:0.000456):0.000190):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/14848at7399.raxml.bestTree
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(((SRR9008168_xAdR-135-Pos-littleb:0.001513,(GCa3-9-littleb-p:0.000245,GCa8-9-littleb-p:0.000120):0.001196):0.000366,(((((Lad4-1-bigB-m-majorityallele:0.005028,SRR9008158_sae-47-Bel-bigB:0.002441):0.000752,gem-1-bigB-m-majorityallele:0.006445):0.000770,((SRR9008232_xAdR-134-Bra-bigB:0.002100,(GCa3-11-bigB-p:0.000726,SRR9008214_meg-130-BZ-bigB:0.000501):0.000506):0.000389,(SRR9008217_int-122-Car-bigB:0.001252,SRR9008197_ric-96-Ros-bigB:0.002156):0.000597):0.000595):0.000270,(SRR9008163_inv-225-Mis-littleb:0.000355,SRR9008275_inv-223-Cor-bigB:0.000861):0.001804):0.000734,(SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000001):0.001240):0.000395):0.000452,SRR9008136_ric-74-Ros-littleb:0.000854,SRR9008167_meg-127-BZ-littleb:0.000363):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/15093at7399.raxml.bestTree
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(GCa3-9-littleb-p:0.000019,GCa8-9-littleb-p:0.000009,((SRR9008168_xAdR-135-Pos-littleb:0.000102,((SRR9008232_xAdR-134-Bra-bigB:0.000056,SRR9008167_meg-127-BZ-littleb:0.000055):0.000009,(((SRR9008275_inv-223-Cor-bigB:0.000075,(SRR9008158_sae-47-Bel-bigB:0.000180,(Lad4-1-bigB-m-majorityallele:0.000266,gem-1-bigB-m-majorityallele:0.000456):0.000055):0.000033):0.000009,((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000130,SRR9008217_int-122-Car-bigB:0.000103):0.000073):0.000009,(SRR9008197_ric-96-Ros-bigB:0.000130,((GCa3-11-bigB-p:0.000037,SRR9008214_meg-130-BZ-bigB:0.000083):0.000001,SRR9008136_ric-74-Ros-littleb:0.000110):0.000028):0.000027):0.000009):0.000019):0.000001,SRR9008163_inv-225-Mis-littleb:0.000073):0.000037):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/15120at7399.raxml.bestTree
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((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000001,(SRR9008163_inv-225-Mis-littleb:0.000440,GCa8-9-littleb-p:0.000440):0.000001,((((SRR9008275_inv-223-Cor-bigB:0.002081,(SRR9008232_xAdR-134-Bra-bigB:0.000823,((SRR9008197_ric-96-Ros-bigB:0.001345,SRR9008217_int-122-Car-bigB:0.001568):0.000330,(GCa3-11-bigB-p:0.000661,SRR9008214_meg-130-BZ-bigB:0.000001):0.000763):0.000400):0.000832):0.000931,(SRR9008158_sae-47-Bel-bigB:0.005786,(gem-1-bigB-m-majorityallele:0.010437,Lad4-1-bigB-m-majorityallele:0.007442):0.000532):0.000405):0.002307,(SRR9008136_ric-74-Ros-littleb:0.000220,(SRR9008167_meg-127-BZ-littleb:0.000220,SRR9008168_xAdR-135-Pos-littleb:0.000220):0.000441):0.000001):0.000440,GCa3-9-littleb-p:0.000220):0.000001):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/15229at7399.raxml.bestTree
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(((SRR9008232_xAdR-134-Bra-bigB:0.000565,SRR9008217_int-122-Car-bigB:0.000659):0.000034,(SRR9008197_ric-96-Ros-bigB:0.001499,(SRR9008214_meg-130-BZ-bigB:0.000657,GCa3-11-bigB-p:0.000614):0.000388):0.000188):0.000080,(SRR9008158_sae-47-Bel-bigB:0.001725,(Lad4-1-bigB-m-majorityallele:0.003393,gem-1-bigB-m-majorityallele:0.005571):0.000965):0.000522,(((SRR9008167_meg-127-BZ-littleb:0.001138,SRR9008136_ric-74-Ros-littleb:0.000758):0.000947,(SRR9008168_xAdR-135-Pos-littleb:0.000290,((SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000001):0.000724,(SRR9008163_inv-225-Mis-littleb:0.000230,(GCa3-9-littleb-p:0.000143,GCa8-9-littleb-p:0.000327):0.000289):0.000114):0.000195):0.000511):0.000496,SRR9008275_inv-223-Cor-bigB:0.000965):0.000139):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/15542at7399.raxml.bestTree
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(GCa3-11-bigB-p:0.000001,SRR9008214_meg-130-BZ-bigB:0.000316,(SRR9008275_inv-223-Cor-bigB:0.001275,(((SRR9008217_int-122-Car-bigB:0.001104,(SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.001128):0.000959,SRR9008232_xAdR-134-Bra-bigB:0.001740):0.000486,(SRR9008158_sae-47-Bel-bigB:0.002557,((Lad4-1-bigB-m-majorityallele:0.005784,gem-1-bigB-m-majorityallele:0.008074):0.000662,(SRR9008197_ric-96-Ros-bigB:0.001608,((SRR9008167_meg-127-BZ-littleb:0.000477,(SRR9008168_xAdR-135-Pos-littleb:0.000317,((GCa8-9-littleb-p:0.000158,GCa3-9-littleb-p:0.000158):0.000001,SRR9008163_inv-225-Mis-littleb:0.000317):0.000158):0.000159):0.000158,SRR9008136_ric-74-Ros-littleb:0.000795):0.000314):0.001541):0.000688):0.000001):0.000634):0.000634):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/16895at7399.raxml.bestTree
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(SRR9008197_ric-96-Ros-bigB:0.002744,SRR9008217_int-122-Car-bigB:0.002149,(((gem-1-bigB-m-majorityallele:0.007807,Lad4-1-bigB-m-majorityallele:0.004787):0.001224,SRR9008158_sae-47-Bel-bigB:0.002744):0.000692,(((SRR9008275_inv-223-Cor-bigB:0.001988,((SRR9008168_xAdR-135-Pos-littleb:0.000558,((SRR9008167_meg-127-BZ-littleb:0.000702,SRR9008136_ric-74-Ros-littleb:0.000850):0.000707,SRR9008163_inv-225-Mis-littleb:0.000990):0.000132):0.000168,(GCa3-9-littleb-p:0.000596,((SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000139):0.000625,GCa8-9-littleb-p:0.000352):0.000310):0.001200):0.000537):0.000433,SRR9008232_xAdR-134-Bra-bigB:0.001244):0.000271,(SRR9008214_meg-130-BZ-bigB:0.001271,GCa3-11-bigB-p:0.000558):0.001284):0.000593):0.000500):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/17022at7399.raxml.bestTree
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((((GCa3-9-littleb-p:0.000148,GCa8-9-littleb-p:0.000001):0.000149,(SRR9008167_meg-127-BZ-littleb:0.000250,SRR9008168_xAdR-135-Pos-littleb:0.000049):0.000100):0.000098,((SRR9008217_int-122-Car-bigB:0.000298,(((SRR9008158_sae-47-Bel-bigB:0.000554,(gem-1-bigB-m-majorityallele:0.001190,Lad4-1-bigB-m-majorityallele:0.000878):0.000397):0.000048,(SRR9008275_inv-223-Cor-bigB:0.000249,(GCa3-11-bigB-p:0.000001,SRR9008214_meg-130-BZ-bigB:0.000199):0.000050):0.000049):0.000049,SRR9008232_xAdR-134-Bra-bigB:0.000299):0.000001):0.000099,((SRR9008166_int-125-Car-littleb:0.000001,SRR9008118_int-124-Car-littleb:0.000001):0.000149,SRR9008163_inv-225-Mis-littleb:0.000001):0.000099):0.000001):0.000050,SRR9008197_ric-96-Ros-bigB:0.000250,SRR9008136_ric-74-Ros-littleb:0.000050):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/17425at7399.raxml.bestTree
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((((GCa3-9-littleb-p:0.000233,GCa8-9-littleb-p:0.000115):0.000131,(SRR9008163_inv-225-Mis-littleb:0.000316,(((SRR9008232_xAdR-134-Bra-bigB:0.000285,(SRR9008197_ric-96-Ros-bigB:0.000363,(SRR9008214_meg-130-BZ-bigB:0.000115,GCa3-11-bigB-p:0.000182):0.000237):0.000047):0.000035,((SRR9008217_int-122-Car-bigB:0.000548,(gem-1-bigB-m-majorityallele:0.001397,(Lad4-1-bigB-m-majorityallele:0.000979,SRR9008158_sae-47-Bel-bigB:0.000574):0.000097):0.000087):0.000082,(SRR9008168_xAdR-135-Pos-littleb:0.000247,SRR9008275_inv-223-Cor-bigB:0.000306):0.000060):0.000055):0.000106,SRR9008136_ric-74-Ros-littleb:0.000359):0.000082):0.000100):0.000001,SRR9008167_meg-127-BZ-littleb:0.000181):0.000165,SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/17602at7399.raxml.bestTree
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(((GCa3-9-littleb-p:0.000826,SRR9008163_inv-225-Mis-littleb:0.000598):0.000337,(SRR9008118_int-124-Car-littleb:0.000010,SRR9008166_int-125-Car-littleb:0.000001):0.000576):0.000184,((SRR9008167_meg-127-BZ-littleb:0.000706,SRR9008136_ric-74-Ros-littleb:0.000823):0.000125,GCa8-9-littleb-p:0.001106):0.000162,((((GCa3-11-bigB-p:0.000606,SRR9008214_meg-130-BZ-bigB:0.000848):0.001189,SRR9008232_xAdR-134-Bra-bigB:0.002138):0.000284,((SRR9008217_int-122-Car-bigB:0.002460,((Lad4-1-bigB-m-majorityallele:0.004543,gem-1-bigB-m-majorityallele:0.007106):0.001353,SRR9008158_sae-47-Bel-bigB:0.003210):0.000753):0.000415,(SRR9008197_ric-96-Ros-bigB:0.001967,SRR9008275_inv-223-Cor-bigB:0.001977):0.000272):0.000115):0.001603,SRR9008168_xAdR-135-Pos-littleb:0.000651):0.000327):0.0;
1 change: 1 addition & 0 deletions QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/18251at7399.raxml.bestTree
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(GCa3-9-littleb-p:0.000207,GCa8-9-littleb-p:0.000177,((SRR9008217_int-122-Car-bigB:0.001976,((((gem-1-bigB-m-majorityallele:0.006272,Lad4-1-bigB-m-majorityallele:0.009678):0.001463,SRR9008158_sae-47-Bel-bigB:0.003503):0.000610,(SRR9008275_inv-223-Cor-bigB:0.002109,SRR9008197_ric-96-Ros-bigB:0.003105):0.001048):0.000369,((SRR9008163_inv-225-Mis-littleb:0.001162,SRR9008168_xAdR-135-Pos-littleb:0.000387):0.001164,(SRR9008232_xAdR-134-Bra-bigB:0.002234,(GCa3-11-bigB-p:0.000691,SRR9008214_meg-130-BZ-bigB:0.001148):0.001284):0.000188):0.000193):0.000255):0.000798,((SRR9008118_int-124-Car-littleb:0.000001,SRR9008166_int-125-Car-littleb:0.000001):0.000773,(SRR9008136_ric-74-Ros-littleb:0.001158,SRR9008167_meg-127-BZ-littleb:0.000390):0.000184):0.000211):0.001120):0.0;
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