GE P-file reader: adaptive character encoding #446
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name: Run code tests on push and pull requests | |
on: | |
push: | |
pull_request: | |
# Allows you to run this workflow manually from the Actions tab | |
workflow_dispatch: | |
jobs: | |
miniconda: | |
name: Miniconda (${{ matrix.python-version }}, ${{ matrix.os }}) | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
os: ["ubuntu-latest"] | |
python-version: [ "3.9", "3.10", "3.11", "3.12", "3.13"] | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
submodules: true | |
lfs: true | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
activate-environment: test | |
environment-file: requirements.yml | |
auto-activate-base: false | |
channels: conda-forge | |
- shell: bash -l {0} | |
run: | | |
conda info | |
conda list | |
- name: Lint | |
shell: bash -l {0} | |
run: | | |
conda install flake8 | |
python -m flake8 spec2nii | |
- name: Run pytest | |
shell: bash -l {0} | |
run: | | |
conda install pytest h5py pillow | |
pip install --no-deps . | |
pytest -m "not orientation" tests |