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  1. genomeGTFtools genomeGTFtools Public

    convert various features into a GFF-like file for use in genome browsers

    Python 69 27

  2. lavaLampPlot lavaLampPlot Public

    instructions, python and R code for generating lava lamp plots of kmer coverage

    Python 6

  3. supermatrix supermatrix Public

    scripts to process, join, split, or add new proteins to a supermatrix alignment using hmms

    Python 9 4

  4. pdbcolor pdbcolor Public

    Python code to color a PDB structure based on parameters from a multiple sequence alignment

    Python 32 7

  5. graphphylo graphphylo Public

    visualization of phylogenetic output files

    R 13 2

  6. genome-size genome-size Public

    examination of genome size across all kingdoms

    R 5 1