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Updating workflows/epigenetics/consensus-peaks from 0.1 to 0.2
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planemo-autoupdate committed Nov 13, 2023
1 parent 88cb73f commit aa7e006
Showing 1 changed file with 18 additions and 28 deletions.
46 changes: 18 additions & 28 deletions workflows/epigenetics/consensus-peaks/consensus-peaks-atac-cutandrun.ga
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Original file line number Diff line number Diff line change
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],
"format-version": "0.1",
"license": "MIT",
"release": "0.1",
"release": "0.2",
"name": "Get Confident Peaks From ATAC or CUTandRUN duplicates",
"steps": {
"0": {
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"output_name": "output"
}
},
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"name": "input1"
}
],
"inputs": [],
"label": "count number of reads",
"name": "Line/Word/Character count",
"outputs": [
Expand All @@ -131,7 +126,7 @@
}
},
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Expand All @@ -140,7 +135,7 @@
},
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"input_connections": {
Expand Down Expand Up @@ -216,15 +211,15 @@
"output_name": "output_treat_pileup"
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Expand Down Expand Up @@ -556,15 +551,15 @@
"output_name": "outFileName"
}
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"when": null,
Expand Down Expand Up @@ -630,12 +625,7 @@
"output_name": "integer_param"
}
},
"inputs": [
{
"description": "runtime parameter for tool Select random lines",
"name": "input"
}
],
"inputs": [],
"label": null,
"name": "Select random lines",
"outputs": [
Expand All @@ -650,7 +640,7 @@
},
"post_job_actions": {},
"tool_id": "random_lines1",
"tool_state": "{\"input\": {\"__class__\": \"RuntimeValue\"}, \"num_lines\": {\"__class__\": \"ConnectedValue\"}, \"seed_source\": {\"seed_source_selector\": \"no_seed\", \"__current_case__\": 0}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
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Expand All @@ -659,7 +649,7 @@
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Expand Down Expand Up @@ -965,7 +955,7 @@
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Expand Down

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