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add docker tests for spack build centos image (QMCPACK#4404)
* add docker tests for spack build centos image * change os to ubuntu, githubrunners have a limited list of supported os's * debug output path * update path and lib path * syntax errror * update env variable mapping * forgot to update variable name in runs script * migrate version to gcc11, remove gcc-toolset * update job names, add missing PATH path * update build scripts to account for new cases of cmake * update actual job names, not just matrix * add /opt/view/lib to library path to access spack libraries * syntax error in runscript * added includes from spack * export fftw_home to help find fftw * try to add include folder through cxxflags * remove cxxflags, manually specify libxml vars * use libxml_root instead * add hdf5 root * add boost root * update binutils to version compatible with gcc11 * added rsync to image, apparently missing * * try running tests with +binutils build spack container * syntax error * syntax error * add back glib fix * Revert "add back glib fix" This reverts commit b61ed0b. * Revert "syntax error" This reverts commit 4794104. * Revert "syntax error" This reverts commit 493f2f6. * Revert "* try running tests with +binutils build spack container" This reverts commit 1390eeb.
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,86 @@ | ||
| # Build stage with Spack pre-installed and ready to be used | ||
| FROM spack/centos-stream as builder | ||
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| # What we want to install and how we want to install it | ||
| # is specified in a manifest file (spack.yaml) | ||
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| RUN which tar | ||
| RUN tar -cf tarfilename.tar -T /dev/null | ||
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| RUN spack install [email protected] | ||
| RUN spack load [email protected] | ||
| RUN spack compiler add $(spack location -i [email protected]) | ||
| RUN spack compilers | ||
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| RUN yum install texinfo -y | ||
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| RUN mkdir /opt/spack-environment \ | ||
| && export gcc_vnew=11.3.0\ | ||
| && export cmake_vnew=3.24.2 \ | ||
| && export libxml2_v=2.9.13 \ | ||
| && export boost_vnew=1.79.0 \ | ||
| && export hdf5_vnew=1.12.2 \ | ||
| && export fftw_vnew=3.3.10 \ | ||
| && (echo "spack:" \ | ||
| && echo " specs:" \ | ||
| && echo " - gcc@${gcc_vnew}%gcc@${gcc_vnew}" \ | ||
| && echo " - texinfo" \ | ||
| && echo " - binutils" \ | ||
| && echo " - git" \ | ||
| && echo " - ninja" \ | ||
| && echo " - cmake@${cmake_vnew}" \ | ||
| && echo " - libxml2@${libxml2_v}%gcc@${gcc_vnew}" \ | ||
| && echo " - boost@${boost_vnew}%gcc@${gcc_vnew}" \ | ||
| && echo " - util-linux-uuid%gcc@${gcc_vnew}" \ | ||
| && echo " - python%gcc@${gcc_vnew}" \ | ||
| && echo " - hdf5@${hdf5_vnew}%gcc@${gcc_vnew} +fortran +hl ~mpi" \ | ||
| && echo " - fftw@${fftw_vnew}%gcc@${gcc_vnew} -mpi" \ | ||
| && echo " - openblas%gcc@${gcc_vnew} threads=openmp" \ | ||
| && echo " - py-lxml" \ | ||
| && echo " - py-matplotlib" \ | ||
| && echo " - py-pandas" \ | ||
| && echo " - py-scipy" \ | ||
| && echo " - py-h5py ^hdf5@${hdf5_vnew}%gcc@${gcc_vnew} +fortran +hl ~mpi" \ | ||
| && echo " concretizer:" \ | ||
| && echo " unify: true" \ | ||
| && echo " config:" \ | ||
| && echo " install_tree: /opt/software" \ | ||
| && echo " build_stage:" \ | ||
| && echo " - $HOME" \ | ||
| && echo " view: /opt/view") > /opt/spack-environment/spack.yaml | ||
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| # Install the software, remove unnecessary deps | ||
| RUN cd /opt/spack-environment && spack env activate . && spack install --fail-fast && spack gc -y | ||
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| # Strip all the binaries | ||
| RUN find -L /opt/view/* -type f -exec readlink -f '{}' \; | \ | ||
| xargs file -i | \ | ||
| grep 'charset=binary' | \ | ||
| grep 'x-executable\|x-archive\|x-sharedlib' | \ | ||
| awk -F: '{print $1}' | xargs strip -s | ||
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| # Modifications to the environment that are necessary to run | ||
| RUN cd /opt/spack-environment && \ | ||
| spack env activate --sh -d . >> /etc/profile.d/z10_spack_environment.sh | ||
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| # Bare OS image to run the installed executables | ||
| FROM quay.io/centos/centos:stream | ||
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| COPY --from=builder /opt/spack-environment /opt/spack-environment | ||
| COPY --from=builder /opt/software /opt/software | ||
| COPY --from=builder /opt/._view /opt/._view | ||
| COPY --from=builder /opt/view /opt/view | ||
| COPY --from=builder /etc/profile.d/z10_spack_environment.sh /etc/profile.d/z10_spack_environment.sh | ||
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| # building from source is missing ld (the linker) | ||
| RUN yum install -y gcc-toolset-11-binutils | ||
| RUN yum install -y rsync | ||
| RUN export PATH=/opt/rh/gcc-toolset-11/root/bin/:$PATH | ||
| RUN yum install -y libgcc.i686 glibc-devel.i686 libstdc++-devel.i686 | ||
| RUN ranlib /opt/view/lib/gcc/x86_64-pc-linux-gnu/11.3.0/libgcc.a | ||
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| ENTRYPOINT ["/bin/bash", "--rcfile", "/etc/profile", "-l", "-c", "$*", "--" ] | ||
| CMD [ "/bin/bash" ] | ||
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