GitHub - wilkelab/rate_variability_variation: Code and data for Jackson et al., Intermediate divergence levels maximize the strength of structure–sequence correlations in enzymes and viral proteins, Protein Science, in press.

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Code and data for Jackson et al., Intermediate divergence levels maximize the strength of structure–sequence correlations in enzymes and viral proteins, Protein Science, in press.

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Name		Name	Last commit message	Last commit date
Latest commit History 59 Commits
pdb_alignments		pdb_alignments
pdb_maps		pdb_maps
protein_design		protein_design
protein_metrics		protein_metrics
rate_calculations		rate_calculations
rsa		rsa
sjs_analyses		sjs_analyses
wcn		wcn
README.txt		README.txt
readme_naming_conventions.txt		readme_naming_conventions.txt

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This repository contains all of the scripts, data and figures for the rate_variability_variation paper.

data/
	Contains the data on all of the proteins in the study

figures/
	Figures

manuscript/
	The manuscript

pdb_maps/
	Contains the maps that map the sequence of the virus structures to the corresponding alignment
	
scripts/
	Contains all of the analysis scripts
	
viral_alignments/
	Contains the virus alignments from Sharamoradi et al. (2014)

readme_naming_conventions.txt
	A file that contains information on the virus proteins from Sharamoradi et al. (2014)

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Code and data for Jackson et al., Intermediate divergence levels maximize the strength of structure–sequence correlations in enzymes and viral proteins, Protein Science, in press.