Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update WP554.gpml #11

Open
wants to merge 6 commits into
base: main
Choose a base branch
from
Open

Conversation

AlexanderPico
Copy link
Member

@AlexanderPico AlexanderPico commented Nov 4, 2023

Pathway Information

WPID: WP554__PR11
TITLE: ACE inhibitor pathway
ORGANISM: Homo sapiens
DESCRIPTION: The core of this pathway was elucidated over a century ago and involves the conversion of angiotensinogen to angiotensin I (Ang I) by renin, its subsequent conversion to angiotensin II (Ang II) by angiotensin converting enzyme. Ang II activates the angiotensin II receptor type 1 to induce aldosterone synthesis, increasing water and salt resorption and potassium excretion in the kidney and increasing blood pressure. Source: PharmGKB (https://www.pharmgkb.org/pathway/PA2023) Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP554 CPTAC Assay Portal]

Note: This is an edit to an existing pathway.


Pathway Page Links

Note: The above URLs will activate after ~5 min.


Generate Metadata Files

  • info.json generated
  • datanodes.tsv generated
  • refs.tsv generated
  • No new author profiles needed
  • bibliography.tsv generated
  • .md generated

Automated Testing

As table

# Test name Notes Result
1 Title Length Title has at least 10 characters. $${\color{green}PASS}$$
2 Description Length Description change exceeds 3 words or 10 characters. $${\color{red}REVIEW REQUIRED}$$
3 Test three $${\color{green}PASS}$$

As checklist

  • Interactions are connected
  • Datanodes are annotated with database references
  • Decription, consisting of 2-3 sentence overview of processes described in the pathway
  • At least one literature reference
  • At least one pathway ontology term
  • Pathway title conforms to the guidelines

ayushi-agrawal-gladstone added a commit that referenced this pull request Nov 11, 2023
ayushi-agrawal-gladstone added a commit that referenced this pull request Nov 13, 2023
@AlexanderPico AlexanderPico reopened this Nov 29, 2023
@AlexanderPico AlexanderPico added the edited pathway submission Submission of an edit to an existing pathway label Nov 29, 2023
@khanspers khanspers self-assigned this Feb 6, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
edited pathway submission Submission of an edit to an existing pathway
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants