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Create WP0.gpml #10

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@AlexanderPico AlexanderPico commented Nov 4, 2023

Pathway Information

WPID: WP0__PR10
TITLE: Vitamin A1 and A5/X pathways
ORGANISM: Homo sapiens
DESCRIPTION: Vitamin A5/X pathway which shows how our food results in precursors from which Vitamin A5/X (9CBC, 9CDHBC, 9CDHROL-ES and 9CDKHROL) is metabolized which is converted into Vitamin A5/X acid (9CDHRA) which binds to RXR.

Note: This is a new pathway submission.


Pathway Page Links

Note: The above URLs will activate after ~5 min.


Generate Metadata Files

  • info.json generated
  • datanodes.tsv generated
  • refs.tsv generated
  • No new author profiles needed
  • bibliography.tsv generated
  • .md generated

Automated Testing

As table

# Test name Link Notes Result
1 Title Length Title has at least 10 characters. $${\color{green}PASS}$$
2 Description Length Description has at least 15 words. $${\color{green}PASS}$$
3 Test three $${\color{green}PASS}$$

As checklist

  • Interactions are connected
  • Datanodes are annotated with database references
  • Decription, consisting of 2-3 sentence overview of processes described in the pathway
  • At least one literature reference
  • At least one pathway ontology term
  • Pathway title conforms to the guidelines

ayushi-agrawal-gladstone pushed a commit that referenced this pull request Nov 13, 2023
@AlexanderPico AlexanderPico added the new pathway submission Submission of a new pathway label Nov 29, 2023
@AlexanderPico AlexanderPico changed the title Create WP0001.gpml Create WP0.gpml Jan 31, 2024
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[Testing GitHub notifications]
Hey @AlexanderPico, nice pathway! Everything looks good, except one of the interactions originating from the "9CBC" node is not properly connected. Please update the PR with an updated gpml...... ;)

Kristina

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@AlexanderPico AlexanderPico left a comment

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test

@AlexanderPico AlexanderPico added author feedback required Feedback from author is required tests passed All tests have passed labels Feb 6, 2024
@khanspers khanspers added author feedback required Feedback from author is required and removed author feedback required Feedback from author is required labels Feb 6, 2024
@AlexanderPico AlexanderPico requested review from khanspers and removed request for khanspers February 7, 2024 01:28
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2 participants