Fix filter vulnerabilities function in case of multiple packages are used

[Rebits]

Description

This PR addresses an issue in the filter_vulnerabilities method to prevent duplicate entries in the vulnerability collection during the E2E vulnerability detection tests.

---

Testing performed

To test this change in the framework, a straightforward test has been developed and executed in a deployed environment.

Packages filter Test 🟢

• Test definition

from wazuh_testing.end_to_end.remote_operations_handler import get_vulnerabilities_index, \
                                                               filter_vulnerabilities_by_packages, \
                                                               filter_vulnerabilities_by_packages_new, \
                                                               get_vulnerabilities_from_states_by_agent
from wazuh_testing.tools.system import HostManager
from wazuh_testing.end_to_end.check_validators import (
    compare_expected_found_vulnerabilities,
    compare_expected_found_vulnerabilities_alerts, empty, empty_dict, equals,
    equals_but_not_empty, no_errors, validate_operation_results, get_duplicated_vulnerabilities)
from wazuh_testing.end_to_end.vulnerability_detector import Vulnerability



hm = HostManager("inv.yaml")
agent_list = ["agent1"]

packages = {
    "from": {
        "centos": {
            "amd64": "grafana-8.5.5-1",
            "arm64v8": "grafana-8.5.5-1"
        },
        "ubuntu": {
            "arm64v8": "grafana-8.5.5",
            "amd64": "grafana-8.5.5"
        },
        "windows": {
            "amd64": "node-v18.20.0"
        },
        "macos": {
            "amd64": "http-proxy-0.7.0",
            "arm64v8": "http-proxy-0.7.0"
        }
    },
    "to": {
        "centos": {
            "amd64": "grafana-9.5.13-1",
            "arm64v8": "grafana-9.5.13-1"
        },
        "ubuntu": {
            "amd64": "grafana-9.5.13",
            "arm64v8": "grafana-9.5.13"
        },
        "windows": {
            "amd64": "node-v18.20.2"
        },
        "macos": {
            "amd64": "http-proxy-0.7.2",
            "arm64v8": "http-proxy-0.7.2"
        }
    }
}


package_data = [packages['from'], packages['to'] ]

vulnerabilities = get_vulnerabilities_from_states_by_agent(hm, agent_list)
package_vulnerabilities_old_function = filter_vulnerabilities_by_packages(hm, vulnerabilities, package_data)
package_vulnerabilities_new_function = filter_vulnerabilities_by_packa

• Result

Old Filter
[{'agent1': [Vulnerability(cve='CVE-2022-31107', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-39201', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-39229', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-36062', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2023-0507', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-39307', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-23552', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-31097', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2023-0594', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-31123', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-39324', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2023-3128', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-39306', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2023-4822', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-35957', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2023-2183', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-31130', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2022-23498', package_name='grafana', package_version='8.5.6-1', architecture='x86_64'), Vulnerability(cve='CVE-2023-1410', package_name='grafana', package_version='8.5.6-1', architecture='x86_64')]}]
New filter
[]
New filter Duplicated vulns
[{'agent1': [Vulnerability(cve='CVE-2022-23498', package_name='grafana', package_version='8.5.6-1', architecture='x86_64')]}] 

[MARCOSD4]

LGTM