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merging with snowman version
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walaj committed Oct 20, 2016
1 parent 16b7f37 commit 5363b2d
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Showing 3 changed files with 4 additions and 5 deletions.
5 changes: 2 additions & 3 deletions SeqLib/BamReader.h
Original file line number Diff line number Diff line change
Expand Up @@ -264,10 +264,9 @@ class BamReader {

GRC m_region; ///< Regions to access

private:
_BamMap m_bams; ///< store the htslib file pointers etc to BAM files

// store the file pointers etc to BAM files
_BamMap m_bams;
private:

// hold the reference for CRAM reading
std::string m_cram_reference;
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2 changes: 1 addition & 1 deletion bwa
Submodule bwa updated from c02766 to fbd4db
2 changes: 1 addition & 1 deletion htslib

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