move data outside of trunk - to big

vladislav-horbatiuk · Sep 3, 2010 · b3504fd · b3504fd
commit b3504fd
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diff --git a/arts/ARTS.dat.bz2 b/arts/ARTS.dat.bz2
diff --git a/asp/Cress.dat.bz2 b/asp/Cress.dat.bz2
diff --git a/asp/Fish.dat.bz2 b/asp/Fish.dat.bz2
diff --git a/asp/Fly.dat.bz2 b/asp/Fly.dat.bz2
diff --git a/asp/Human.dat.bz2 b/asp/Human.dat.bz2
diff --git a/asp/Worm.dat.bz2 b/asp/Worm.dat.bz2
diff --git a/easysvm/C_elegans_acc_100000.fasta.bz2 b/easysvm/C_elegans_acc_100000.fasta.bz2
diff --git a/easysvm/C_elegans_acc_gc.arff b/easysvm/C_elegans_acc_gc.arff
diff --git a/easysvm/C_elegans_acc_gc.csv b/easysvm/C_elegans_acc_gc.csv
diff --git a/easysvm/C_elegans_acc_modsel.fasta.bz2 b/easysvm/C_elegans_acc_modsel.fasta.bz2
diff --git a/easysvm/C_elegans_acc_modsel_gc.arff b/easysvm/C_elegans_acc_modsel_gc.arff
diff --git a/easysvm/C_elegans_acc_modsel_gc.csv b/easysvm/C_elegans_acc_modsel_gc.csv
diff --git a/easysvm/C_elegans_acc_modsel_seq.arff b/easysvm/C_elegans_acc_modsel_seq.arff
diff --git a/easysvm/C_elegans_acc_modsel_seq.csv b/easysvm/C_elegans_acc_modsel_seq.csv
diff --git a/easysvm/C_elegans_acc_modsel_seq.fa b/easysvm/C_elegans_acc_modsel_seq.fa
diff --git a/easysvm/C_elegans_acc_modsel_seq2.arff b/easysvm/C_elegans_acc_modsel_seq2.arff
diff --git a/easysvm/C_elegans_acc_modsel_seq2.csv b/easysvm/C_elegans_acc_modsel_seq2.csv
diff --git a/easysvm/C_elegans_acc_seq.arff b/easysvm/C_elegans_acc_seq.arff
diff --git a/easysvm/C_elegans_acc_seq.csv b/easysvm/C_elegans_acc_seq.csv
diff --git a/easysvm/C_elegans_acc_seq.fa b/easysvm/C_elegans_acc_seq.fa
diff --git a/easysvm/C_elegans_acc_seq2.arff b/easysvm/C_elegans_acc_seq2.arff
diff --git a/easysvm/C_elegans_acc_seq2.csv b/easysvm/C_elegans_acc_seq2.csv
diff --git a/easysvm/README b/easysvm/README
@@ -0,0 +1,18 @@
+# The splice site data was obtained from:
+wget ftp://ftp.tuebingen.mpg.de/fml/behr/splicing/C_elegans/acceptor_splice_site/C_elegans_acc_all_examples.fasta.bz2
+
+# The first 100000 examples was obtained by:
+bunzip2 C_elegans_acc_all_examples.fasta.bz2
+head -n 200000 C_elegans_acc_all_examples.fasta > C_elegans_acc_100000.fasta
+grep ">" C_elegans_acc_100000.fasta | wc -l
+bzip2 C_elegans_acc_100000.fasta
+
+# The last 100000 examples was obtained by:
+bunzip2 C_elegans_acc_all_examples.fasta.bz2
+tail -n 200000 C_elegans_acc_all_examples.fasta > C_elegans_acc_modsel.fasta
+grep ">" C_elegans_acc_modsel.fasta | wc -l
+bzip2 C_elegans_acc_modsel.fasta
+
+
+# Clean up
+rm C_elegans_acc_all_examples.fasta