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Add Cellranger count #163

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Merge branch 'main' into cell_ranger_count
emmarousseau authored Oct 31, 2024
commit c7f35a5102915c3224a6f843c3a6984fab06aeaf
9 changes: 9 additions & 0 deletions CHANGELOG.md
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## BREAKING CHANGES

* `rseqc`:
- `rseqc/rseqc_inner_distance`: Calculate inner distance between read pairs (PR #159).
- `rseqc/rseqc_inferexperiment`: Infer strandedness from sequencing reads (PR #158).
- `rseqc/bam_stat`: Generate statistics from a bam file (PR #155).

* `nanoplot`: Plotting tool for long read sequencing data and alignments (PR #95).

## BUG FIXES

* `falco`: Fix a typo in the `--reverse_complement` argument (PR #157).

* `cutadapt`: Fix the the non-functional `action` parameter (PR #161).
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