Code

Add agat sp merge annotations#106

Code

Merged

rcannood merged 24 commits intomainviash-hub/biobox:mainfrom add-agat_sp_merge_annotationsviash-hub/biobox:add-agat_sp_merge_annotationsCopy head branch name to clipboardOct 26, 2024

+268

Commits

Commits on Jul 31, 2024

• add help

  Leila011

  committed
  625241e

• add config

  Leila011

  committed
  43dc3eb

• add test data and expected output + srcipt to fetch them

  Leila011

  committed
  5375f59

• add run script and handle multiple inputs

  Leila011

  committed
  11d6afa

• add test

  Leila011

  committed
  7761dd3

• update changelog

  Leila011

  committed
  5e3b25b

• fix typo

  Leila011

  committed
  ea35b1d

Commits on Aug 8, 2024

• add second test

  Leila011

  committed
  1993277

Commits on Aug 13, 2024

• Merge main into add-agat_sp_merge_annotations

  rcannood

  committed
  2fd0bea

Commits on Aug 19, 2024

• Update src/agat/agat_sp_merge_annotations/config.vsh.yaml

  Show description for ca292ad
  

  Leila011

  and

  DriesSchaumont

  authored
  ca292ad

• Update src/agat/agat_sp_merge_annotations/config.vsh.yaml

  Show description for 3eaf196
  

  Leila011

  and

  DriesSchaumont

  authored
  3eaf196

• Update src/agat/agat_sp_merge_annotations/config.vsh.yaml

  Show description for d4aa71c
  

  Leila011

  and

  DriesSchaumont

  authored
  d4aa71c

• Update src/agat/agat_sp_merge_annotations/config.vsh.yaml

  Show description for cfda348
  

  Leila011

  and

  DriesSchaumont

  authored
  cfda348

• update --config description

  Leila011

  committed
  29501fb

• remove unset IFS

  Leila011

  committed
  ead79bb

• add temporary directory and cleanup on exit

  Leila011

  committed
  188c69e

• update clean up on exit function

  Leila011

  committed
  face09b

• add set -eo pipefail to test and script

  Leila011

  committed
  b36eb36

• fix create temporary directory

  Leila011

  committed
  cffbf33

• cleanup changelog

  Leila011

  committed
  277765f

• cleanup changelog

  Leila011

  committed
  d7b6a20

Commits on Oct 26, 2024

• Minor formatting changes

  emmarousseau

  committed
  90db9f1

• Merge branch 'main' into add-agat_sp_merge_annotations

  emmarousseau

  authored
  de37709

• Merge branch 'main' into add-agat_sp_merge_annotations

  rcannood

  authored
  e268a10