Code

Add agat sp add introns#104

Code

Merged

rcannood merged 24 commits intomainviash-hub/biobox:mainfrom add-agat_sp_add_intronsviash-hub/biobox:add-agat_sp_add_intronsCopy head branch name to clipboardOct 26, 2024

+420-1

Commits

Commits on Jul 31, 2024

• add help

  Leila011

  committed
  07c5dd4

• add config

  Leila011

  committed
  f6f887a

• add run script

  Leila011

  committed
  1409e8a

• add test data and expected output + script to fetch them

  Leila011

  committed
  dd68148

• add tests

  Leila011

  committed
  e40c215

• update changelog

  Leila011

  committed
  c0f4dd6

Commits on Aug 13, 2024

• Merge main into add-agat_sp_add_introns

  rcannood

  committed
  79e5ca6

Commits on Aug 19, 2024

• Update src/agat/agat_sp_add_introns/config.vsh.yaml

  Show description for b52c6d5
  

  Leila011

  and

  DriesSchaumont

  authored
  b52c6d5

• Update src/agat/agat_sp_add_introns/config.vsh.yaml

  Show description for e362183
  

  Leila011

  and

  DriesSchaumont

  authored
  e362183

• Update src/agat/agat_sp_add_introns/config.vsh.yaml

  Show description for bde55e6
  

  Leila011

  and

  DriesSchaumont

  authored
  bde55e6

• # create temporary directory and clean up on exit

  Leila011

  committed
  b8499b5

• add set -e to test

  Leila011

  committed
  76c2dd1

• fix create temporary directory

  Leila011

  committed
  73baa4f

• fix create temporary directory

  Leila011

  committed
  e7bdd68

• add set -eo pipefail to test

  Leila011

  committed
  8c32ea3

• add set -eo pipefail to script

  Leila011

  committed
  9b5cf4d

• remove file added by mistake

  Leila011

  committed
  0ea3d00

• update --config description

  Leila011

  committed
  c1d37d6

• cleanup changelog

  Leila011

  committed
  06ad12a

• cleanup changelog

  Leila011

  committed
  7e83343

Commits on Oct 7, 2024

• Merge branch 'main' into add-agat_sp_add_introns

  emmarousseau

  authored
  624c5bf

• minor changes to config

  emmarousseau

  committed
  55cc2b5

• reduce test data size

  emmarousseau

  committed
  ec76a94

Commits on Oct 26, 2024

• Merge branch 'main' into add-agat_sp_add_introns

  emmarousseau

  authored
  ba37c90