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update test lofreq call
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KaiWaldrant committed Feb 6, 2024
1 parent a54ab73 commit fc36c64
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3 changes: 3 additions & 0 deletions src/lofreq/call/test.sh
Original file line number Diff line number Diff line change
Expand Up @@ -14,4 +14,7 @@ echo "> Run lofreq call"
echo ">> Checking output"
[ ! -f "output.vcf" ] && echo "Output file output.vcf does not exist" && exit 1

echo ">> Check if output is empty"
[ ! -s "output.vcf" ] && echo "Output file output.vcf is empty" && exit 1

echo "> Test successful"

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