reduce test data size

viash-hub · Oct 7, 2024 · ec76a94 · ec76a94
1 parent 55cc2b5
commit ec76a94
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Showing 6 changed files with 235 additions and 2,085 deletions.
diff --git a/src/agat/agat_sp_add_introns/test.sh b/src/agat/agat_sp_add_introns/test.sh
@@ -16,7 +16,7 @@ trap clean_up EXIT
 
 echo "> Run $meta_name with test data"
 "$meta_executable" \
-  --gff "$test_dir/1.gff" \
+  --gff "$test_dir/1_truncated.gff" \
   --output "$TMPDIR/output.gff" 
 
 echo ">> Checking output"
@@ -26,7 +26,7 @@ echo ">> Check if output is empty"
 [ ! -s "$TMPDIR/output.gff" ] && echo "Output file output.gff is empty" && exit 1
 
 echo ">> Check if output matches expected output"
-diff "$TMPDIR/output.gff" "$test_dir/agat_sp_add_introns_1.gff"
+diff "$TMPDIR/output.gff" "$test_dir/test_output.gff"
 if [ $? -ne 0 ]; then
   echo "Output file output.gff does not match expected output"
   exit 1