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rcannood committed Jan 31, 2024
1 parent 09433d2 commit dc3e8b9
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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* `bgzip`: Add bgzip functionality to compress and decompress files (PR #13).

* `featureCounts`: Assign sequence reads to genomic features (PR #11).
* `featurecounts`: Assign sequence reads to genomic features (PR #11).

## MAJOR CHANGES

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2 changes: 0 additions & 2 deletions src/featurecounts/config.vsh.yaml
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commands: [ featureCounts ]

argument_groups:

- name: Inputs
arguments:
- name: --annotation
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Specify attribute type in GTF annotation. 'gene_id' by default. Meta-features used for read counting will be extracted from annotation using the provided value.
example: "gene_id"
required: false

- name: --extra_attributes
type: string
description: |
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