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fix test
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rcannood committed Aug 22, 2024
1 parent 1ef5e7e commit d5866b5
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/bd_rhapsody/bd_rhapsody_sequence_analysis/test.py
Original file line number Diff line number Diff line change
Expand Up @@ -470,7 +470,7 @@ def generate_bd_smk_fastq_files(

# check prot data
data_prot = data.mod["prot"]
assert data_prot.n_vars == len(sampletagsequences_fasta_dict), "Number of proteins is incorrect"
assert data_prot.n_vars == len(bdabseq_panel_fasta_dict), "Number of proteins is incorrect"
assert data_prot.X.sum(axis=1).min() > 950, "Number of reads per cell is incorrect"
assert data_prot.var.Raw_Reads.sum() == 100000, "Number of reads is incorrect"

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