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Update src/cellranger/cellranger_mkref/script.sh
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rcannood authored Nov 8, 2024
1 parent 48ce1be commit 919df7a
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions src/cellranger/cellranger_mkref/script.sh
Original file line number Diff line number Diff line change
Expand Up @@ -32,7 +32,7 @@ cellranger mkref \
--genome output \
${par_reference_version:+--ref-version $par_reference_version} \
${meta_cpus:+--nthreads $meta_cpus} \
${meta_memory_gb:+--memgb $(($meta_memory_gb-2))} # always keep 2 gb for the OS itseld
${meta_memory_gb:+--memgb $(($meta_memory_gb-2))} # always keep 2 gb for the OS itself

echo "> Creating archive"
tar --use-compress-program="pigz -k " -cf "$par_output" -C "$tmpdir/output" .
tar --use-compress-program="pigz -k " -cf "$par_output" -C "$tmpdir/output" .

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