run script: handle multiple input

viash-hub · Aug 7, 2024 · 89aff1a · 89aff1a
1 parent 8d1b485
commit 89aff1a
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/src/agat/agat_sp_complement_annotations/script.sh b/src/agat/agat_sp_complement_annotations/script.sh
@@ -8,9 +8,9 @@
 
 # Convert a list of file names to multiple -gff arguments
 input_files=""
-IFS=";" read -ra file_names <<< "$par_gff"
+IFS=";" read -ra file_names <<< "$par_add"
 for file in "${file_names[@]}"; do
-    input_files+="--gff $file "
+    input_files+="--add $file "
 done
 unset IFS