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update changelog
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rcannood committed Jul 17, 2024
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- `bd_rhapsody/bd_rhapsody_make_reference`: Create a reference for the BD Rhapsody pipeline (PR #75).

## BUG FIXES
## MINOR CHANGES

* `pear`: fix component not exiting with the correct exitcode when PEAR fails.
* `busco` components: update BUSCO to `5.7.1` (PR #72).

* `cutadapt`: fix `--par_quality_cutoff_r2` argument.
## DOCUMENTATION

* `cutadapt`: demultiplexing is now disabled by default. It can be re-enabled by using `demultiplex_mode`.
* Extend the contributing guidelines (PR #82):

* `multiqc`: update multiple separator to `;` (PR #81).
- Update format to Viash 0.9.

## MINOR CHANGES
- Descriptions should be formatted in markdown.

- Add defaults to descriptions, not as a default of the argument.

- Explain parameter expansion.

* `busco` components: update BUSCO to `5.7.1`.

## BUG FIXES

* `pear`: fix component not exiting with the correct exitcode when PEAR fails (PR #70).

* `cutadapt`: fix `--par_quality_cutoff_r2` argument (PR #69).

* `cutadapt`: demultiplexing is now disabled by default. It can be re-enabled by using `demultiplex_mode` (PR #69).

* `multiqc`: update multiple separator to `;` (PR #81).

# biobox 0.1.0

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