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Update config.vsh.yaml
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tgaspe committed Aug 6, 2024
1 parent 0ac91d7 commit 38c816e
Showing 1 changed file with 17 additions and 6 deletions.
23 changes: 17 additions & 6 deletions src/bedtools/bedtools_groupby/config.vsh.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ argument_groups:
type: file
direction: input
description: |
The input file (BED/GFF/VCF/BAM) to be used as the -a file.
The input BED file to be used.
required: true
example: input_a.bed

Expand All @@ -33,16 +33,27 @@ argument_groups:
type: file
direction: output
description: |
The output BED file.
The output groupby BED file.
required: true
example: output.bed

- name: Options
arguments:
- name:
alternatives:
type: boolean_true
description:
- name: --groupby
alternatives: -g
type: string
description: |
Specify the columns (1-based) for the grouping.
The columns must be comma separated.
- Default: 1,2,3
# - name: --groupby
# alternatives: -g
# type: string
# description: |
# Specify the columns (1-based) for the grouping.
# The columns must be comma separated.
# - Default: 1,2,3

resources:
- type: bash_script
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